ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: tetraspanin 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000011105 TSPAN9 9606 + 12:3077355-3286564 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000011898 TSPAN9-001 3077377-3286558 protein_coding
  ENST00000407263 TSPAN9-003 3201175-3282108 protein_coding
  ENST00000431374 TSPAN9-006 3215251-3281281 processed_transcript
  ENST00000444315 TSPAN9-005 3077377-3279006 nonsense_mediated_decay
  ENST00000492305 TSPAN9-002 3272912-3280471 processed_transcript
  ENST00000537971 TSPAN9-201 3077355-3286564 protein_coding
  ENST00000539631 TSPAN9-004 3077428-3084210 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000011898ENST00000537971
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000011898 17.716±0.00 37.003±18.34 3.589±0.00 20.577±0.00 17.153±12.98
ENST00000537971 5.004±0.00 9.695±3.60 N/A 15.049±0.00 9.025±6.98

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0003XN CIL_0003XN_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005886 IDA plasma membrane
GO:0005925 IDA focal adhesion
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0097197 IDA tetraspanin-enriched microdomain

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000025299 tspan9a protein_coding Danio_rerio
ENSDARG00000045706 tspan9b protein_coding Danio_rerio
ENSMUSG00000030352 Tspan9 protein_coding Mus_musculus

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