ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: replication termination factor 2 domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000022277 RTFDC1 9606 + 20:56468585-56519449 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000023939 RTFDC1-201 56468585-56518886 protein_coding
  ENST00000357348 RTFDC1-001 56468591-56519449 protein_coding
  ENST00000395881 RTFDC1-004 56468614-56518887 protein_coding
  ENST00000449062 RTFDC1-006 56468678-56517201 protein_coding
  ENST00000466260 RTFDC1-007 56468686-56477032 processed_transcript
  ENST00000477485 RTFDC1-008 56513391-56518245 retained_intron
  ENST00000477573 RTFDC1-003 56515694-56518887 retained_intron
  ENST00000484084 RTFDC1-005 56468658-56473360 processed_transcript
  ENST00000487211 RTFDC1-002 56468679-56474759 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000023939ENST00000357348ENST00000395881ENST00000449062
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000023939 23.768±0.28 17.920±6.23 15.673±0.00 24.026±0.00 17.093±9.24
ENST00000357348 N/A 5.078±2.42 N/A N/A 10.175±6.59
ENST00000395881 28.993±14.77 41.963±12.66 38.858±0.00 25.498±0.00 32.095±26.56
ENST00000449062 N/A 16.989±1.62 N/A N/A 13.938±1.78

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00099D CIL_00099D_0001 VISTA
CIL_00036G CIL_00036G_0001 CGP
CIL_00015M CIL_00015M_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040607 rtfdc1 protein_coding Danio_rerio
ENSMUSG00000027502 Rtfdc1 protein_coding Mus_musculus

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