ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: S-phase kinase-associated protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000113558 SKP1 9606 - 5:134148935-134177038 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000328392 SKP1-008 134157941-134176950 protein_coding
  ENST00000353411 SKP1-001 134148935-134177038 protein_coding
  ENST00000517625 SKP1-004 134157508-134176719 protein_coding
  ENST00000517691 SKP1-013 134157474-134161897 retained_intron
  ENST00000519054 SKP1-011 134158480-134176958 nonsense_mediated_decay
  ENST00000519321 SKP1-003 134158484-134176950 protein_coding
  ENST00000520417 SKP1-006 134160996-134174765 protein_coding
  ENST00000521216 SKP1-009 134157392-134176920 protein_coding
  ENST00000522552 SKP1-002 134157338-134176964 protein_coding
  ENST00000522855 SKP1-005 134157572-134176950 protein_coding
  ENST00000523359 SKP1-007 134173967-134175570 protein_coding
  ENST00000523966 SKP1-010 134157510-134176950 nonsense_mediated_decay
  ENST00000524288 SKP1-012 134173387-134176950 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000328392ENST00000353411ENST00000517625ENST00000521216ENST00000522855ENST00000523966
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000328392 N/A 240.122±45.02 N/A 213.291±0.00 253.649±135.40
ENST00000353411 N/A 5.359±0.26 2.668±0.00 N/A 2.882±1.12
ENST00000517625 77.438±0.00 N/A N/A N/A 66.321±30.80
ENST00000521216 171.430±19.55 180.411±30.16 35.794±0.00 140.949±0.00 90.785±32.45
ENST00000522855 122.768±0.00 N/A N/A N/A N/A
ENST00000523966 N/A N/A N/A N/A 48.076±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0000GN CIL_0000GN_0002 CGP
CIL_00089W CIL_00089W_0001 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000082 TAS G1/S transition of mitotic cell cycle
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0005829 TAS cytosol
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0007219 TAS Notch signaling pathway
GO:0016032 TAS viral process
GO:0016567 IDA protein ubiquitination
GO:0019005 IDA SCF ubiquitin ligase complex
GO:0031145 TAS anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031146 IDA SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031467 IDA Cul7-RING ubiquitin ligase complex
GO:0031519 IDA PcG protein complex
GO:0035518 IDA histone H2A monoubiquitination
GO:0051437 TAS positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051439 TAS regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003151 skp1 protein_coding Danio_rerio
ENSMUSG00000036309 Skp1a protein_coding Mus_musculus

Loading