ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: pre-mRNA processing factor 38B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000134186 PRPF38B 9606 + 1:108692323-108701803 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000370021 PRPF38B-002 108692341-108701803 protein_coding
  ENST00000370022 PRPF38B-004 108692324-108697504 protein_coding
  ENST00000370025 PRPF38B-001 108692323-108701803 protein_coding
  ENST00000467302 PRPF38B-003 108692327-108697504 processed_transcript
  ENST00000485810 PRPF38B-005 108697700-108699385 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000370021ENST00000370022ENST00000370025ENST00000467302ENST00000485810
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000370021 N/A 1.450±0.00 3.663±0.00 2.716±0.00 N/A
ENST00000370022 N/A N/A N/A N/A 1.372±0.71
ENST00000370025 3.619±0.65 6.924±3.27 8.880±0.00 9.715±0.00 9.646±6.27
ENST00000467302 N/A 2.486±0.00 N/A N/A 3.195±2.14
ENST00000485810 N/A 2.442±0.05 N/A N/A 7.176±3.50

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005681 IEA spliceosomal complex
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053101 prpf38b protein_coding Danio_rerio
ENSMUSG00000027881 Prpf38b protein_coding Mus_musculus

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