ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: solute carrier family 39 (zinc transporter), member 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165915 SLC39A13 9606 + 11:47407132-47416501 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000354884 SLC39A13-011 47408631-47416496 protein_coding
  ENST00000362021 SLC39A13-012 47408629-47416501 protein_coding
  ENST00000524886 SLC39A13-013 47414862-47415434 processed_transcript
  ENST00000524928 SLC39A13-003 47410085-47416494 protein_coding
  ENST00000526614 SLC39A13-004 47409591-47413697 protein_coding
  ENST00000527091 SLC39A13-005 47409821-47412039 protein_coding
  ENST00000527829 SLC39A13-014 47414437-47415416 processed_transcript
  ENST00000528979 SLC39A13-009 47414296-47415095 processed_transcript
  ENST00000529740 SLC39A13-006 47412302-47413880 processed_transcript
  ENST00000531419 SLC39A13-010 47408605-47413778 protein_coding
  ENST00000531865 SLC39A13-008 47408628-47414901 protein_coding
  ENST00000531974 SLC39A13-007 47408584-47412393 protein_coding
  ENST00000533076 SLC39A13-001 47407132-47416495 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000354884ENST00000362021ENST00000524928
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000354884 26.646±8.06 19.233±11.12 6.381±0.00 26.156±0.00 24.614±16.34
ENST00000362021 7.600±0.00 6.501±2.45 N/A N/A 7.253±1.60
ENST00000524928 N/A 0.845±0.02 N/A N/A 8.249±8.50

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0002LM CIL_0002LM_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005385 IC zinc ion transmembrane transporter activity
GO:0005794 ISS Golgi apparatus
GO:0006882 ISS cellular zinc ion homeostasis
GO:0016020 IEA membrane
GO:0016021 IDA integral component of membrane
GO:0030001 IEA metal ion transport
GO:0030173 IC integral component of Golgi membrane
GO:0042803 IPI protein homodimerization activity
GO:0046873 IEA metal ion transmembrane transporter activity
GO:0048471 ISS perinuclear region of cytoplasm
GO:0055085 IEA transmembrane transport
GO:0061448 IMP connective tissue development
GO:0071577 ISS zinc ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000000442 slc39a13 protein_coding Danio_rerio
ENSMUSG00000002105 Slc39a13 protein_coding Mus_musculus

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