ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000009246 Trpm5 10090 - 7:143069153-143094642 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000009390 Trpm5-001 143071789-143094642 protein_coding
  ENSMUST00000126776 Trpm5-005 143071217-143074853 retained_intron
  ENSMUST00000133027 Trpm5-006 143080716-143081922 retained_intron
  ENSMUST00000136602 Trpm5-008 143071091-143074037 protein_coding
  ENSMUST00000146075 Trpm5-004 143072178-143087129 retained_intron
  ENSMUST00000148715 Trpm5-007 143069153-143074561 protein_coding
  ENSMUST00000150589 Trpm5-003 143071529-143087214 retained_intron
  ENSMUST00000150867 Trpm5-002 143072342-143094606 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0009BT CIL_0009BT_0002 VISTA
CIL_0008VI CIL_0008VI_0002 VISTA
CIL_0008FP CIL_0008FP_0002 VISTA
CIL_0008A3 CIL_0008A3_0002 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005227 IDA calcium activated cation channel activity
GO:0005244 IEA voltage-gated ion channel activity
GO:0005267 IDA potassium channel activity
GO:0005272 IDA sodium channel activity
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0034220 IDA ion transmembrane transport
GO:0034765 IEA regulation of ion transmembrane transport
GO:0035725 IDA sodium ion transmembrane transport
GO:0050909 IEA sensory perception of taste
GO:0071805 IDA potassium ion transmembrane transport
GO:0098655 IDA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059792 trpm5 protein_coding Danio_rerio
ENSG00000070985 TRPM5 transient receptor potential cation channel, subfamily M, member 5 protein_coding Homo_sapiens

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