ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026229 Psmd1 10090 + 1:86064387-86139151 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027432 Psmd1-001 86064619-86139151 protein_coding
  ENSMUST00000127104 Psmd1-006 86064871-86075819 processed_transcript
  ENSMUST00000133480 Psmd1-005 86064692-86072284 retained_intron
  ENSMUST00000139715 Psmd1-002 86064619-86132749 nonsense_mediated_decay
  ENSMUST00000143200 Psmd1-003 86064387-86071660 processed_transcript
  ENSMUST00000147807 Psmd1-004 86064387-86070776 retained_intron
  ENSMUST00000149946 Psmd1-009 86127867-86132767 retained_intron
  ENSMUST00000152184 Psmd1-007 86110817-86132800 processed_transcript
  ENSMUST00000189234 Psmd1-010 86064641-86067662 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000027432
Transcript ID C166 Tie2+ EC mES
ENSMUST00000027432 46.902±9.65 26.681±5.91 11.705±3.54

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00076M CIL_00076M_0002 CGP
CIL_0004KX CIL_0004KX_0003 CGP

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000502 IDA proteasome complex
GO:0005515 IPI protein binding
GO:0022624 IDA proteasome accessory complex
GO:0030234 IEA enzyme regulator activity
GO:0042176 IEA regulation of protein catabolic process
GO:0050790 IEA regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003189 psmd1 protein_coding Danio_rerio
ENSG00000173692 PSMD1 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 protein_coding Homo_sapiens

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