ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036309 Skp1a 10090 + 11:52231995-52246858 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000037324 Skp1a-001 52232009-52246858 protein_coding
  ENSMUST00000093121 Skp1a-003 52232037-52238424 retained_intron
  ENSMUST00000109072 Skp1a-002 52232189-52246858 protein_coding
  ENSMUST00000116595 Skp1a-005 52236864-52246052 nonsense_mediated_decay
  ENSMUST00000147684 Skp1a-004 52231995-52245094 nonsense_mediated_decay
  ENSMUST00000166537 Skp1a-006 52232037-52245097 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000037324ENSMUST00000166537
Transcript ID C166 Tie2+ EC mES
ENSMUST00000037324 135.324±7.45 80.724±41.82 178.824±25.92
ENSMUST00000166537 135.425±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00089W CIL_00089W_0002 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 IC ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005829 IDA cytosol
GO:0006511 IC ubiquitin-dependent protein catabolic process
GO:0016567 IEA protein ubiquitination
GO:0019005 ISS SCF ubiquitin ligase complex
GO:0031146 IDA SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031467 IDA Cul7-RING ubiquitin ligase complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003151 skp1 protein_coding Danio_rerio
ENSG00000113558 SKP1 S-phase kinase-associated protein 1 protein_coding Homo_sapiens
ENSG00000272772 CTD-2410N18.5 Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000430774} protein_coding Homo_sapiens

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