ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: polypyrimidine tract binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000350092 PTBP1-019 ENSG00000011304 9606 + 19:799406-812222 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHMVEC-DHUVECENST00000350092
Transcript ID HAoEC HMVEC-D HUVEC
ENST00000350092 11.073±0.80 35.679±0.00 37.125±9.54

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0006397 IEA mRNA processing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172282 Ptbp1-001 protein_coding Mus_musculus 0 1975
ENSMUST00000165153 Ptbp1-004 retained_intron Mus_musculus 0 1347
ENSMUST00000057343 Ptbp1-008 nonsense_mediated_decay Mus_musculus 0 985
ENSMUST00000165704 Ptbp1-002 protein_coding Mus_musculus 0 985
ENSMUST00000095457 Ptbp1-005 protein_coding Mus_musculus 0 898
ENSMUST00000171216 Ptbp1-016 retained_intron Mus_musculus 0 863
ENSMUST00000169580 Ptbp1-006 retained_intron Mus_musculus 0 758
ENSMUST00000168988 Ptbp1-013 retained_intron Mus_musculus 0 691
ENSMUST00000099958 Ptbp1-009 processed_transcript Mus_musculus 0 608
ENSMUST00000164385 Ptbp1-018 retained_intron Mus_musculus 0 514
ENSMUST00000165724 Ptbp1-017 nonsense_mediated_decay Mus_musculus 0 479
ENSDART00000040308 ptbp3-201 protein_coding Danio_rerio 0 303
ENSDART00000146727 ptbp3-001 protein_coding Danio_rerio 0 303
ENSMUST00000169091 Ptbp1-015 protein_coding Mus_musculus 0 294
ENSMUST00000169483 Ptbp1-012 nonsense_mediated_decay Mus_musculus 0 248

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