ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409643 PSMD1-003 ENSG00000173692 9606 + 2:231056894-231170712 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHUVECENST00000409643
Transcript ID HAoEC HUVEC
ENST00000409643 13.734±3.33 18.351±2.07

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 TAS G1/S transition of mitotic cell cycle
GO:0000209 TAS protein polyubiquitination
GO:0000278 TAS mitotic cell cycle
GO:0000502 IDA:IEA proteasome complex
GO:0002474 TAS antigen processing and presentation of peptide antigen via MHC class I
GO:0002479 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0005488 IEA binding
GO:0005654 TAS nucleoplasm
GO:0005829 TAS cytosol
GO:0005838 TAS proteasome regulatory particle
GO:0006521 TAS regulation of cellular amino acid metabolic process
GO:0006915 TAS apoptotic process
GO:0006977 TAS DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0022624 ISS proteasome accessory complex
GO:0030234 IEA enzyme regulator activity
GO:0031145 TAS anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0042176 IEA regulation of protein catabolic process
GO:0042590 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I
GO:0042981 TAS regulation of apoptotic process
GO:0043066 TAS negative regulation of apoptotic process
GO:0044281 TAS small molecule metabolic process
GO:0051436 TAS negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051437 TAS positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051439 TAS regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027432 Psmd1-001 protein_coding Mus_musculus 0 3367
ENSMUST00000139715 Psmd1-002 nonsense_mediated_decay Mus_musculus 0 2852
ENSDART00000007346 psmd1-201 protein_coding Danio_rerio 0 1378
ENSDART00000144100 psmd1-001 protein_coding Danio_rerio 0 1352
ENSMUST00000152184 Psmd1-007 processed_transcript Mus_musculus 0 739
ENSMUST00000133480 Psmd1-005 retained_intron Mus_musculus 0 479
ENSMUST00000127104 Psmd1-006 processed_transcript Mus_musculus 0 459
ENSMUST00000149946 Psmd1-009 retained_intron Mus_musculus 0 274
ENSMUST00000194872 Gm38216-001 processed_pseudogene Mus_musculus 0 209
ENSMUST00000143200 Psmd1-003 processed_transcript Mus_musculus 3e-37 161
ENSMUST00000147807 Psmd1-004 retained_intron Mus_musculus 3e-37 161

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