ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info

Description: polypyrimidine tract binding protein 1 pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000554374 PTBP1P-001 ENSG00000259078 9606 + 14:65279267-65281166 processed_pseudogene

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHUVECENST00000554374
Transcript ID HAoEC HUVEC
ENST00000554374 0.049±0.04 0.036±0.03

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000165704 Ptbp1-002 protein_coding Mus_musculus 0 1399
ENSMUST00000095457 Ptbp1-005 protein_coding Mus_musculus 0 1216
ENSMUST00000057343 Ptbp1-008 nonsense_mediated_decay Mus_musculus 0 863
ENSMUST00000172282 Ptbp1-001 protein_coding Mus_musculus 0 815
ENSMUST00000171216 Ptbp1-016 retained_intron Mus_musculus 0 671
ENSMUST00000165153 Ptbp1-004 retained_intron Mus_musculus 0 592
ENSMUST00000168988 Ptbp1-013 retained_intron Mus_musculus 0 558
ENSMUST00000099958 Ptbp1-009 processed_transcript Mus_musculus 0 518
ENSMUST00000169580 Ptbp1-006 retained_intron Mus_musculus 0 507
ENSMUST00000164385 Ptbp1-018 retained_intron Mus_musculus 0 412
ENSMUST00000165724 Ptbp1-017 nonsense_mediated_decay Mus_musculus 0 385
ENSMUST00000169091 Ptbp1-015 protein_coding Mus_musculus 0 261
ENSMUST00000169483 Ptbp1-012 nonsense_mediated_decay Mus_musculus 0 224

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