ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info

Description: polypyrimidine tract binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000585956 PTBP1-016 ENSG00000011304 9606 + 19:804623-808646 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHUVECENST00000585956
Transcript ID HAoEC HUVEC
ENST00000585956 146.335±49.70 62.729±58.11

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172282 Ptbp1-001 protein_coding Mus_musculus 0 634
ENSMUST00000165724 Ptbp1-017 nonsense_mediated_decay Mus_musculus 0 614
ENSMUST00000165153 Ptbp1-004 retained_intron Mus_musculus 0 534
ENSMUST00000171216 Ptbp1-016 retained_intron Mus_musculus 0 464
ENSMUST00000095457 Ptbp1-005 protein_coding Mus_musculus 0 459
ENSMUST00000057343 Ptbp1-008 nonsense_mediated_decay Mus_musculus 0 459
ENSMUST00000165704 Ptbp1-002 protein_coding Mus_musculus 0 459
ENSDART00000040308 ptbp3-201 protein_coding Danio_rerio 0 250
ENSDART00000146727 ptbp3-001 protein_coding Danio_rerio 0 250
ENSMUST00000169580 Ptbp1-006 retained_intron Mus_musculus 0 220
ENSMUST00000164385 Ptbp1-018 retained_intron Mus_musculus 0 220

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