ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: polypyrimidine tract binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000586944 PTBP1-004 ENSG00000011304 9606 + 19:797428-811289 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHUVECENST00000586944
Transcript ID HAoEC HUVEC
ENST00000586944 3.397±0.00 7.828±8.03

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172282 Ptbp1-001 protein_coding Mus_musculus 0 1090
ENSMUST00000165704 Ptbp1-002 protein_coding Mus_musculus 0 1088
ENSMUST00000057343 Ptbp1-008 nonsense_mediated_decay Mus_musculus 0 1074
ENSMUST00000164385 Ptbp1-018 retained_intron Mus_musculus 0 900
ENSMUST00000171216 Ptbp1-016 retained_intron Mus_musculus 0 859
ENSMUST00000095457 Ptbp1-005 protein_coding Mus_musculus 0 817
ENSMUST00000165153 Ptbp1-004 retained_intron Mus_musculus 0 817
ENSMUST00000169580 Ptbp1-006 retained_intron Mus_musculus 0 758
ENSMUST00000168988 Ptbp1-013 retained_intron Mus_musculus 0 691
ENSMUST00000099958 Ptbp1-009 processed_transcript Mus_musculus 0 608
ENSMUST00000165724 Ptbp1-017 nonsense_mediated_decay Mus_musculus 0 460
ENSDART00000040308 ptbp3-201 protein_coding Danio_rerio 0 300
ENSDART00000146727 ptbp3-001 protein_coding Danio_rerio 0 300
ENSMUST00000169091 Ptbp1-015 protein_coding Mus_musculus 0 294
ENSMUST00000169483 Ptbp1-012 nonsense_mediated_decay Mus_musculus 0 248
ENSMUST00000167250 Lppr3-002 protein_coding Mus_musculus 8.40779e-45 187

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