ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info

Description: polypyrimidine tract binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000589575 PTBP1-006 ENSG00000011304 9606 + 19:797462-805017 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHUVECENST00000589575
Transcript ID HAoEC HUVEC
ENST00000589575 117.438±32.05 14.901±0.00

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057343 Ptbp1-008 nonsense_mediated_decay Mus_musculus 0 791
ENSMUST00000165704 Ptbp1-002 protein_coding Mus_musculus 0 791
ENSMUST00000172282 Ptbp1-001 protein_coding Mus_musculus 0 791
ENSMUST00000168988 Ptbp1-013 retained_intron Mus_musculus 0 649
ENSMUST00000165153 Ptbp1-004 retained_intron Mus_musculus 0 643
ENSMUST00000171216 Ptbp1-016 retained_intron Mus_musculus 0 610
ENSMUST00000099958 Ptbp1-009 processed_transcript Mus_musculus 0 568
ENSMUST00000095457 Ptbp1-005 protein_coding Mus_musculus 0 555
ENSMUST00000169091 Ptbp1-015 protein_coding Mus_musculus 0 259
ENSMUST00000169483 Ptbp1-012 nonsense_mediated_decay Mus_musculus 0 237
ENSDART00000040308 ptbp3-201 protein_coding Danio_rerio 5e-40 169
ENSDART00000146727 ptbp3-001 protein_coding Danio_rerio 5e-40 169

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