ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: RNA pseudouridylate synthase domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000007376 RPUSD1 9606 - 16:784974-788397 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000007264 RPUSD1-001 784974-788383 protein_coding
  ENST00000561734 RPUSD1-004 784974-787981 protein_coding
  ENST00000562070 RPUSD1-010 786194-787469 protein_coding
  ENST00000563560 RPUSD1-009 786841-788329 protein_coding
  ENST00000565377 RPUSD1-005 785983-788381 protein_coding
  ENST00000565503 RPUSD1-006 786826-788340 nonsense_mediated_decay
  ENST00000565809 RPUSD1-002 784991-788371 protein_coding
  ENST00000567114 RPUSD1-003 785014-788397 protein_coding
  ENST00000567283 RPUSD1-008 786149-788333 nonsense_mediated_decay
  ENST00000569601 RPUSD1-007 785968-788334 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000007264ENST00000561734ENST00000565377ENST00000565809ENST00000567114
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000007264 9.951±0.00 15.725±9.12 N/A N/A 13.626±14.40
ENST00000561734 N/A N/A 3.308±0.00 N/A 1.324±1.71
ENST00000565377 N/A N/A N/A N/A 4.864±0.00
ENST00000565809 9.205±0.00 4.912±0.22 2.931±0.00 3.096±0.00 4.214±2.64
ENST00000567114 9.509±0.00 2.757±1.28 N/A 7.610±0.00 3.423±1.96

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001522 IEA pseudouridine synthesis
GO:0003674 ND molecular_function
GO:0003723 IEA RNA binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0009451 IEA RNA modification
GO:0009982 IEA pseudouridine synthase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060192 rpusd1 protein_coding Danio_rerio
ENSMUSG00000041199 Rpusd1 protein_coding Mus_musculus

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