ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: SEC62 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000008952 SEC62 9606 + 3:169966635-169998373 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000337002 SEC62-001 169966765-169998373 protein_coding
  ENST00000460513 SEC62-004 169966801-169983253 nonsense_mediated_decay
  ENST00000461933 SEC62-011 169966635-169968523 processed_transcript
  ENST00000469515 SEC62-005 169966815-169988359 nonsense_mediated_decay
  ENST00000469890 SEC62-009 169982869-169983939 retained_intron
  ENST00000470355 SEC62-010 169985129-169992721 processed_transcript
  ENST00000480708 SEC62-002 169966808-169993831 protein_coding
  ENST00000481435 SEC62-007 169966826-169985885 retained_intron
  ENST00000487736 SEC62-008 169966814-169982857 nonsense_mediated_decay
  ENST00000497277 SEC62-012 169975451-169982859 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000337002ENST00000460513ENST00000469515ENST00000470355ENST00000480708ENST00000481435
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000337002 4.575±0.37 4.060±1.99 14.127±0.00 9.363±0.00 6.118±4.37
ENST00000460513 N/A N/A N/A N/A 32.468±4.01
ENST00000469515 N/A N/A N/A N/A 22.976±0.00
ENST00000470355 N/A N/A N/A N/A 42.299±4.50
ENST00000480708 4.493±0.00 12.071±6.23 N/A 26.244±0.00 20.659±15.38
ENST00000481435 36.005±0.00 N/A 93.076±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00049M CIL_00049M_0002 CGP
CIL_0002XU CIL_0002XU_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004872 TAS receptor activity
GO:0005524 IEA ATP binding
GO:0005783 TAS endoplasmic reticulum
GO:0005791 ISS rough endoplasmic reticulum
GO:0006613 TAS cotranslational protein targeting to membrane
GO:0006620 IMP posttranslational protein targeting to membrane
GO:0006810 IEA transport
GO:0008565 IEA protein transporter activity
GO:0015031 IEA protein transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019951 sec62 protein_coding Danio_rerio
ENSMUSG00000027706 Sec62 protein_coding Mus_musculus

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