ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: AT rich interactive domain 4A (RBP1-like)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000032219 ARID4A 9606 + 14:58298385-58373887 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000348476 ARID4A-201 58298504-58373730 protein_coding
  ENST00000355431 ARID4A-001 58298385-58373733 protein_coding
  ENST00000395168 ARID4A-003 58298556-58372226 protein_coding
  ENST00000417477 ARID4A-009 58331287-58365300 protein_coding
  ENST00000424658 ARID4A-006 58299331-58304990 protein_coding
  ENST00000431317 ARID4A-002 58299537-58373887 protein_coding
  ENST00000431612 ARID4A-004 58298559-58306112 nonsense_mediated_decay
  ENST00000445108 ARID4A-005 58298588-58330169 protein_coding
  ENST00000466065 ARID4A-008 58365475-58371960 retained_intron
  ENST00000469635 ARID4A-007 58353454-58360991 retained_intron
  ENST00000553355 ARID4A-010 58351297-58359172 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000348476ENST00000355431ENST00000395168ENST00000417477ENST00000431317ENST00000431612ENST00000445108
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000348476 N/A 0.057±0.00 N/A N/A 0.590±0.00
ENST00000355431 0.221±0.00 1.154±0.76 0.248±0.00 2.277±0.00 2.071±1.51
ENST00000395168 N/A 0.803±0.54 N/A 1.525±0.00 1.452±1.06
ENST00000417477 N/A 0.088±0.00 N/A N/A 1.961±0.00
ENST00000431317 N/A 0.189±0.20 N/A N/A 0.430±0.07
ENST00000431612 N/A N/A N/A N/A 1.811±0.00
ENST00000445108 N/A 0.348±0.00 N/A N/A 0.083±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0004LX CIL_0004LX_0001 CGP
CIL_0001K9 CIL_0001K9_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006349 IEA regulation of gene expression by genetic imprinting
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0007283 IEA spermatogenesis
GO:0017053 IDA transcriptional repressor complex
GO:0034773 IEA histone H4-K20 trimethylation
GO:0036124 IEA histone H3-K9 trimethylation
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0048821 IEA erythrocyte development
GO:0080182 IEA histone H3-K4 trimethylation
GO:0097368 IEA establishment of Sertoli cell barrier

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043873 arid4a protein_coding Danio_rerio
ENSMUSG00000048118 Arid4a protein_coding Mus_musculus

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