ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: superkiller viralicidic activity 2-like 2 (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000039123 SKIV2L2 9606 + 5:55307760-55425581 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000230640 SKIV2L2-001 55307760-55425581 protein_coding
  ENST00000502953 SKIV2L2-008 55327530-55343372 retained_intron
  ENST00000503165 SKIV2L2-006 55308010-55329407 processed_transcript
  ENST00000504388 SKIV2L2-004 55308001-55324705 processed_transcript
  ENST00000504997 SKIV2L2-005 55308069-55347129 processed_transcript
  ENST00000505565 SKIV2L2-007 55322327-55344620 nonsense_mediated_decay
  ENST00000506750 SKIV2L2-002 55308001-55425106 nonsense_mediated_decay
  ENST00000508716 SKIV2L2-003 55416056-55424985 protein_coding
  ENST00000518955 SKIV2L2-009 55405252-55416129 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHMVEC-DHUVECENST00000230640ENST00000504388ENST00000506750ENST00000508716
Transcript ID BECs HAoEC HMVEC-D HUVEC
ENST00000230640 N/A N/A 5.077±0.00 3.735±1.66
ENST00000504388 N/A N/A N/A 34.510±5.31
ENST00000506750 3.856±0.00 9.100±4.27 18.482±0.00 7.196±5.68
ENST00000508716 N/A N/A N/A 1.200±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007G0 CIL_0007G0_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000178 IDA exosome (RNase complex)
GO:0000398 IC mRNA splicing, via spliceosome
GO:0000460 IMP maturation of 5.8S rRNA
GO:0003676 IEA nucleic acid binding
GO:0004386 IEA helicase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0016817 IEA hydrolase activity, acting on acid anhydrides
GO:0016818 IEA hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0044822 IDA poly(A) RNA binding
GO:0071013 IDA catalytic step 2 spliceosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013457 skiv2l2 protein_coding Danio_rerio
ENSMUSG00000016018 Skiv2l2 protein_coding Mus_musculus

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