ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: tetraspanin 17
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000048140 TSPAN17 9606 + 5:176647387-176659054 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000298564 TSPAN17-009 176647467-176659054 protein_coding
  ENST00000310032 TSPAN17-001 176647387-176659020 protein_coding
  ENST00000503030 TSPAN17-005 176647502-176657618 nonsense_mediated_decay
  ENST00000503045 TSPAN17-008 176647561-176657732 protein_coding
  ENST00000504168 TSPAN17-007 176647505-176656956 protein_coding
  ENST00000507471 TSPAN17-006 176647620-176657056 protein_coding
  ENST00000508164 TSPAN17-003 176647502-176659051 protein_coding
  ENST00000514705 TSPAN17-004 176647497-176659053 retained_intron
  ENST00000515708 TSPAN17-002 176647568-176659053 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000298564ENST00000310032ENST00000507471ENST00000508164ENST00000514705ENST00000515708
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000298564 7.040±2.69 3.509±2.17 N/A N/A 4.484±1.10
ENST00000310032 N/A N/A N/A N/A 5.948±1.88
ENST00000507471 N/A N/A N/A N/A 5.078±2.91
ENST00000508164 10.232±5.07 10.277±5.04 3.062±0.00 13.406±0.00 14.297±9.36
ENST00000514705 N/A 0.484±0.10 N/A N/A 2.626±1.86
ENST00000515708 25.490±8.86 8.171±2.66 3.513±0.00 8.642±0.00 6.254±3.14

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00098R CIL_00098R_0001 VISTA
CIL_0002NB CIL_0002NB_0001 CGP
CIL_0002NA CIL_0002NA_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000151 NAS ubiquitin ligase complex
GO:0004842 NAS ubiquitin-protein transferase activity
GO:0016021 IEA integral component of membrane
GO:0016567 NAS protein ubiquitination
GO:0019899 IPI enzyme binding
GO:0072594 IDA establishment of protein localization to organelle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000025875 Tspan17 protein_coding Mus_musculus

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