ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: polymerase (RNA) I polypeptide A, 194kDa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000068654 POLR1A 9606 - 2:86020216-86106155 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263857 POLR1A-001 86020216-86106155 protein_coding
  ENST00000409024 POLR1A-004 86083082-86105874 nonsense_mediated_decay
  ENST00000409681 POLR1A-002 86026328-86106155 protein_coding
  ENST00000424089 POLR1A-005 86081617-86105886 nonsense_mediated_decay
  ENST00000462078 POLR1A-008 86039325-86040519 processed_transcript
  ENST00000471427 POLR1A-011 86027966-86028799 processed_transcript
  ENST00000483538 POLR1A-006 86054138-86065714 processed_transcript
  ENST00000486964 POLR1A-003 86078041-86105873 retained_intron
  ENST00000492034 POLR1A-009 86031504-86038917 processed_transcript
  ENST00000496892 POLR1A-010 86031421-86037070 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHMVEC-DHUVECENST00000263857ENST00000409681ENST00000486964
Transcript ID BECs HAoEC HMVEC-D HUVEC
ENST00000263857 N/A 3.395±1.81 3.028±0.00 2.234±1.23
ENST00000409681 1.248±0.28 8.570±2.49 5.218±0.00 2.557±1.53
ENST00000486964 N/A 7.673±0.14 N/A 1.243±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007WR CIL_0007WR_0001 VISTA
CIL_00084P CIL_00084P_0001 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001054 IBA RNA polymerase I activity
GO:0003677 IEA DNA binding
GO:0003899 IEA DNA-directed RNA polymerase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005730 IDA nucleolus
GO:0005736 IEA DNA-directed RNA polymerase I complex
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006360 TAS transcription from RNA polymerase I promoter
GO:0006361 TAS transcription initiation from RNA polymerase I promoter
GO:0006362 TAS transcription elongation from RNA polymerase I promoter
GO:0006363 TAS termination of RNA polymerase I transcription
GO:0008270 IEA zinc ion binding
GO:0010467 TAS gene expression

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000049553 Polr1a protein_coding Mus_musculus

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