ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: spectrin, beta, erythrocytic
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000070182 SPTB 9606 - 14:64746283-64879883 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000342835 SPTB-002 64748307-64763840 processed_transcript
  ENST00000389720 SPTB-007 64766700-64823094 protein_coding
  ENST00000389721 SPTB-004 64766399-64823127 protein_coding
  ENST00000389722 SPTB-201 64746284-64823148 protein_coding
  ENST00000542694 SPTB-006 64767324-64768213 retained_intron
  ENST00000553938 SPTB-003 64748937-64782550 protein_coding
  ENST00000556227 SPTB-005 64748955-64757541 retained_intron
  ENST00000556626 SPTB-001 64746283-64879883 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHUVECENST00000389721ENST00000556227
Transcript ID BECs HAoEC HHSEC HUVEC
ENST00000389721 N/A 0.477±0.04 N/A N/A
ENST00000556227 0.063±0.02 N/A 0.096±0.00 0.090±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00010L CIL_00010L_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 TAS:IEA actin binding
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005886 IEA plasma membrane
GO:0006779 IEA porphyrin-containing compound biosynthetic process
GO:0007009 IEA plasma membrane organization
GO:0007411 TAS axon guidance
GO:0008091 IEA spectrin
GO:0009986 IDA cell surface
GO:0014731 IDA spectrin-associated cytoskeleton
GO:0015629 TAS actin cytoskeleton
GO:0016020 IEA membrane
GO:0030097 IEA hemopoiesis
GO:0030506 IPI ankyrin binding
GO:0030863 IEA cortical cytoskeleton
GO:0031235 TAS intrinsic component of the cytoplasmic side of the plasma membrane
GO:0043234 IDA protein complex
GO:0046982 IEA protein heterodimerization activity
GO:0051015 IDA actin filament binding
GO:0051693 IEA actin filament capping

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000030490 sptb protein_coding Danio_rerio
ENSMUSG00000021061 Sptb protein_coding Mus_musculus

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