ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: family with sequence similarity 3, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000071889 FAM3A 9606 - X:154506159-154516242 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000322269 FAM3A-201 154506160-154516242 protein_coding
  ENST00000359889 FAM3A-001 154506159-154516236 protein_coding
  ENST00000369641 FAM3A-012 154506535-154516238 protein_coding
  ENST00000369643 FAM3A-003 154506171-154516116 protein_coding
  ENST00000393572 FAM3A-017 154506640-154516160 protein_coding
  ENST00000412894 FAM3A-009 154508289-154516170 nonsense_mediated_decay
  ENST00000416319 FAM3A-008 154507247-154516215 nonsense_mediated_decay
  ENST00000419205 FAM3A-202 154506160-154516242 protein_coding
  ENST00000421517 FAM3A-016 154508316-154516165 nonsense_mediated_decay
  ENST00000426266 FAM3A-020 154507406-154516217 protein_coding
  ENST00000433619 FAM3A-014 154511868-154516229 nonsense_mediated_decay
  ENST00000434658 FAM3A-011 154506204-154516242 nonsense_mediated_decay
  ENST00000440318 FAM3A-013 154507680-154515821 nonsense_mediated_decay
  ENST00000442929 FAM3A-018 154508572-154516209 protein_coding
  ENST00000447601 FAM3A-004 154506171-154516239 protein_coding
  ENST00000449971 FAM3A-007 154507203-154516230 nonsense_mediated_decay
  ENST00000457212 FAM3A-006 154507811-154516237 nonsense_mediated_decay
  ENST00000475657 FAM3A-010 154506711-154507591 retained_intron
  ENST00000492763 FAM3A-015 154508769-154516165 processed_transcript
  ENST00000497506 FAM3A-019 154508453-154516158 processed_transcript
  ENST00000612856 FAM3A-005 154506173-154511412 retained_intron
  ENST00000621967 FAM3A-002 154506171-154516242 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000322269ENST00000359889ENST00000369641ENST00000369643ENST00000419205ENST00000434658ENST00000447601ENST00000612856ENST00000621967
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000322269 4.934±0.00 3.984±1.24 N/A N/A 3.562±2.27
ENST00000359889 N/A 3.127±0.00 N/A N/A 8.660±4.48
ENST00000369641 N/A 0.605±0.00 N/A N/A N/A
ENST00000369643 24.698±16.97 12.962±2.24 22.338±0.00 2.318±0.00 4.267±2.30
ENST00000419205 N/A 3.636±1.89 N/A N/A 4.382±3.71
ENST00000434658 N/A 4.967±0.48 N/A 1.968±0.00 3.854±0.00
ENST00000447601 7.792±0.00 0.788±0.00 N/A 5.088±0.00 6.728±4.48
ENST00000612856 N/A N/A N/A N/A 0.426±0.14
ENST00000621967 N/A 2.697±1.51 N/A 2.624±0.00 5.003±2.43

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0003LG CIL_0003LG_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070675 fam3a protein_coding Danio_rerio
ENSMUSG00000031399 Fam3a protein_coding Mus_musculus

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