ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: gasdermin B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000073605 GSDMB 9606 - 17:39904595-39919854 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000309481 GSDMB-002 39904595-39918590 protein_coding
  ENST00000360317 GSDMB-003 39904595-39917316 protein_coding
  ENST00000394175 GSDMB-001 39904595-39917540 protein_coding
  ENST00000394179 GSDMB-201 39904597-39917316 protein_coding
  ENST00000418519 GSDMB-202 39904597-39918650 protein_coding
  ENST00000464556 GSDMB-006 39909453-39917147 retained_intron
  ENST00000468820 GSDMB-008 39905965-39912343 nonsense_mediated_decay
  ENST00000477054 GSDMB-016 39904596-39919854 retained_intron
  ENST00000479136 GSDMB-007 39904595-39907739 retained_intron
  ENST00000486560 GSDMB-009 39905271-39905938 retained_intron
  ENST00000519429 GSDMB-014 39906195-39907499 retained_intron
  ENST00000520542 GSDMB-010 39904597-39918635 protein_coding
  ENST00000522564 GSDMB-012 39904812-39917316 nonsense_mediated_decay
  ENST00000523371 GSDMB-011 39904812-39917316 nonsense_mediated_decay
  ENST00000524039 GSDMB-013 39904812-39917316 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000309481ENST00000360317ENST00000394175ENST00000394179ENST00000464556ENST00000477054ENST00000479136ENST00000520542ENST00000524039
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000309481 1.665±0.00 N/A N/A N/A N/A
ENST00000360317 N/A 0.933±0.78 N/A N/A N/A
ENST00000394175 1.168±0.00 0.727±0.71 3.607±0.00 N/A 0.513±0.42
ENST00000394179 4.458±1.72 1.799±0.00 4.106±0.00 N/A 0.783±0.57
ENST00000464556 N/A 0.404±0.00 N/A N/A N/A
ENST00000477054 0.590±0.00 0.533±0.50 0.890±0.00 1.727±0.00 0.736±0.58
ENST00000479136 1.549±0.00 1.323±0.08 1.722±0.00 N/A 0.276±0.28
ENST00000520542 N/A 0.327±0.00 N/A N/A N/A
ENST00000524039 N/A N/A N/A N/A 0.218±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00080Z CIL_00080Z_0001 VISTA
CIL_00098W CIL_00098W_0001 VISTA
CIL_0007WH CIL_0007WH_0001 VISTA
CIL_00098Y CIL_00098Y_0001 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm

Homologs

No Homologs available.

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