ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: slingshot protein phosphatase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000084112 SSH1 9606 - 12:108778192-108857590 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000326470 SSH1-003 108791926-108827551 protein_coding
  ENST00000326495 SSH1-001 108778192-108857590 protein_coding
  ENST00000546433 SSH1-004 108784797-108807690 nonsense_mediated_decay
  ENST00000546697 SSH1-007 108809719-108826286 protein_coding
  ENST00000546812 SSH1-006 108811258-108826394 processed_transcript
  ENST00000547381 SSH1-008 108807793-108811634 retained_intron
  ENST00000547862 SSH1-010 108807612-108817380 retained_intron
  ENST00000548522 SSH1-005 108807675-108857513 nonsense_mediated_decay
  ENST00000551165 SSH1-002 108791919-108857590 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHMVEC-DHUVECENST00000326495ENST00000546433ENST00000551165
Transcript ID BECs HAoEC HMVEC-D HUVEC
ENST00000326495 0.485±0.00 1.906±0.72 1.694±0.00 3.807±2.34
ENST00000546433 N/A 2.540±0.36 10.851±0.00 9.441±5.92
ENST00000551165 N/A N/A N/A 0.244±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0001GO CIL_0001GO_0002 CGP
CIL_0001VP CIL_0001VP_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000902 IMP cell morphogenesis
GO:0003677 IEA DNA binding
GO:0003779 IDA actin binding
GO:0004721 IDA phosphoprotein phosphatase activity
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005886 IDA plasma membrane
GO:0006470 IMP:IEA protein dephosphorylation
GO:0008064 IBA regulation of actin polymerization or depolymerization
GO:0008138 IBA:IEA protein tyrosine/serine/threonine phosphatase activity
GO:0010591 IBA regulation of lamellipodium assembly
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0030036 IMP actin cytoskeleton organization
GO:0032268 IDA regulation of cellular protein metabolic process
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0042995 IEA cell projection
GO:0050770 IBA regulation of axonogenesis
GO:0071318 IDA cellular response to ATP

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010031 ssh1b protein_coding Danio_rerio
ENSDARG00000056780 ssh1a protein_coding Danio_rerio
ENSMUSG00000042121 Ssh1 protein_coding Mus_musculus

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