ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: lysophosphatidylcholine acyltransferase 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000087253 LPCAT2 9606 + 16:55508998-55586670 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262134 LPCAT2-001 55508998-55586670 protein_coding
  ENST00000562299 LPCAT2-008 55579018-55583237 retained_intron
  ENST00000563095 LPCAT2-005 55545485-55574729 retained_intron
  ENST00000564084 LPCAT2-004 55528493-55542028 protein_coding
  ENST00000565056 LPCAT2-007 55556923-55583012 processed_transcript
  ENST00000566375 LPCAT2-006 55549306-55551333 retained_intron
  ENST00000566911 LPCAT2-003 55509072-55526058 retained_intron
  ENST00000566915 LPCAT2-002 55532039-55586666 retained_intron
  ENST00000615823 LPCAT2-201 55532039-55586662 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000262134ENST00000564084ENST00000566911ENST00000566915ENST00000615823
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000262134 2.604±0.00 11.727±4.53 0.366±0.00 1.152±0.00 18.190±10.81
ENST00000564084 7.440±0.28 N/A N/A N/A N/A
ENST00000566911 N/A N/A N/A N/A 8.731±0.00
ENST00000566915 N/A N/A N/A N/A 7.499±5.11
ENST00000615823 N/A N/A N/A N/A 1.645±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007WY CIL_0007WY_0001 VISTA
CIL_000988 CIL_000988_0001 VISTA
CIL_00098D CIL_00098D_0001 VISTA
CIL_0005P6 CIL_0005P6_0001 CGP
CIL_0000PT CIL_0000PT_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003841 IEA 1-acylglycerol-3-phosphate O-acyltransferase activity
GO:0005509 IEA calcium ion binding
GO:0005783 ISS endoplasmic reticulum
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005795 ISS Golgi stack
GO:0005811 IDA lipid particle
GO:0006644 TAS phospholipid metabolic process
GO:0006663 ISS platelet activating factor biosynthetic process
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0016746 IEA transferase activity, transferring acyl groups
GO:0036151 IDA phosphatidylcholine acyl-chain remodeling
GO:0044281 TAS small molecule metabolic process
GO:0046474 TAS glycerophospholipid biosynthetic process
GO:0047184 ISS 1-acylglycerophosphocholine O-acyltransferase activity
GO:0047192 ISS 1-alkylglycerophosphocholine O-acetyltransferase activity
GO:0061024 ISS membrane organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053010 lpcat2 protein_coding Danio_rerio
ENSMUSG00000033192 Lpcat2 protein_coding Mus_musculus

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