ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000093183 SEC22C 9606 - 3:42547969-42601080 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264454 SEC22C-002 42552924-42581962 protein_coding
  ENST00000273156 SEC22C-001 42547971-42582028 protein_coding
  ENST00000383750 SEC22C-009 42561117-42581951 nonsense_mediated_decay
  ENST00000416880 SEC22C-013 42563547-42581960 protein_coding
  ENST00000417572 SEC22C-005 42548004-42601080 protein_coding
  ENST00000420163 SEC22C-015 42563845-42581943 protein_coding
  ENST00000423701 SEC22C-004 42547969-42581942 protein_coding
  ENST00000445388 SEC22C-011 42563524-42581987 nonsense_mediated_decay
  ENST00000449617 SEC22C-006 42548183-42581962 nonsense_mediated_decay
  ENST00000450981 SEC22C-010 42561215-42600524 protein_coding
  ENST00000451653 SEC22C-003 42547969-42563632 protein_coding
  ENST00000454141 SEC22C-012 42563545-42581950 nonsense_mediated_decay
  ENST00000456222 SEC22C-016 42563927-42582023 processed_transcript
  ENST00000456515 SEC22C-008 42555931-42582327 protein_coding
  ENST00000487701 SEC22C-014 42563609-42564415 retained_intron
  ENST00000493107 SEC22C-007 42561115-42581901 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHMVEC-DHUVECENST00000273156ENST00000417572ENST00000451653
Transcript ID BECs HAoEC HMVEC-D HUVEC
ENST00000273156 N/A 12.615±0.69 N/A 10.288±2.68
ENST00000417572 8.502±1.47 N/A N/A N/A
ENST00000451653 2.121±0.61 5.743±1.41 12.194±0.00 8.400±2.70

Conserved Regions

Region IDSub-RegionRegion Type
CIL_000480 CIL_000480_0001 CGP
CIL_00047Z CIL_00047Z_0001 CGP

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0006810 IEA transport
GO:0006888 TAS ER to Golgi vesicle-mediated transport
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063387 sec22c protein_coding Danio_rerio
ENSMUSG00000061536 Sec22c protein_coding Mus_musculus

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