ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: negative elongation factor complex member C/D
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000101158 NELFCD 9606 + 20:58981208-58995133 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000344018 NELFCD-201 58981276-58995096 protein_coding
  ENST00000460601 NELFCD-010 58981275-58995133 nonsense_mediated_decay
  ENST00000464363 NELFCD-006 58981275-58986761 retained_intron
  ENST00000471621 NELFCD-007 58981252-58987421 retained_intron
  ENST00000474543 NELFCD-002 58989019-58995133 retained_intron
  ENST00000477741 NELFCD-008 58987710-58995133 retained_intron
  ENST00000478389 NELFCD-011 58990095-58995133 retained_intron
  ENST00000479207 NELFCD-004 58991312-58995133 processed_transcript
  ENST00000482747 NELFCD-009 58981275-58990400 retained_intron
  ENST00000486263 NELFCD-005 58993923-58995133 retained_intron
  ENST00000490205 NELFCD-001 58991037-58991922 retained_intron
  ENST00000492016 NELFCD-012 58981252-58987969 retained_intron
  ENST00000497935 NELFCD-013 58990896-58993544 processed_transcript
  ENST00000602795 NELFCD-003 58981208-58995133 protein_coding

Homo sapiens Ensembl GRCh38

Genome
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Sequences
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Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000344018ENST00000460601ENST00000474543ENST00000478389ENST00000479207ENST00000482747ENST00000486263ENST00000497935ENST00000602795
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000344018 N/A 6.579±4.58 N/A 7.641±0.00 9.994±4.87
ENST00000460601 N/A 16.392±3.69 N/A N/A N/A
ENST00000474543 N/A N/A 9.276±0.00 4.936±0.00 13.676±9.59
ENST00000478389 N/A 1.090±0.08 2.230±0.00 2.402±0.00 4.321±3.46
ENST00000479207 23.972±3.09 7.234±0.00 21.669±0.00 N/A N/A
ENST00000482747 N/A N/A N/A N/A 9.322±6.00
ENST00000486263 22.892±2.49 N/A 37.947±0.00 N/A N/A
ENST00000497935 N/A 20.166±0.00 N/A N/A N/A
ENST00000602795 7.655±4.92 15.117±5.72 3.943±0.00 9.867±0.00 21.029±9.82

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0002U2 CIL_0002U2_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006368 TAS transcription elongation from RNA polymerase II promoter
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0032021 IDA NELF complex
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0050434 TAS positive regulation of viral transcription

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021097 nelfcd protein_coding Danio_rerio
ENSMUSG00000016253 Nelfcd protein_coding Mus_musculus

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