ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: cadherin 20, type 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000101542 CDH20 9606 + 18:61333582-61555773 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262717 CDH20-001 61333582-61555773 protein_coding
  ENST00000536675 CDH20-201 61490542-61555132 protein_coding
  ENST00000538374 CDH20-002 61334273-61554695 protein_coding
  ENST00000587582 CDH20-003 61549866-61554358 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000262717ENST00000536675ENST00000538374ENST00000587582
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000262717 0.070±0.00 0.023±0.01 0.025±0.00 N/A 0.077±0.12
ENST00000536675 N/A 0.030±0.02 N/A N/A 0.018±0.01
ENST00000538374 N/A 0.036±0.01 N/A 0.098±0.00 0.017±0.01
ENST00000587582 N/A 0.143±0.08 N/A 0.763±0.00 0.150±0.04

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007FG CIL_0007FG_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000050840 Cdh20 protein_coding Mus_musculus

Loading