ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: RIO kinase 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000101782 RIOK3 9606 + 18:23452823-23486603 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000339486 RIOK3-001 23452823-23483140 protein_coding
  ENST00000577250 RIOK3-011 23477188-23486603 protein_coding
  ENST00000577501 RIOK3-002 23453308-23481500 protein_coding
  ENST00000581220 RIOK3-005 23479007-23483137 retained_intron
  ENST00000581302 RIOK3-003 23453292-23482528 retained_intron
  ENST00000581339 RIOK3-004 23466169-23481365 retained_intron
  ENST00000581585 RIOK3-008 23453287-23481580 protein_coding
  ENST00000584052 RIOK3-009 23453288-23464294 retained_intron
  ENST00000584130 RIOK3-007 23466135-23477203 nonsense_mediated_decay
  ENST00000584960 RIOK3-006 23453287-23463319 retained_intron
  ENST00000584992 RIOK3-010 23464556-23467577 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000339486ENST00000577501ENST00000581220ENST00000581302ENST00000581585ENST00000584052
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000339486 1.136±0.00 5.329±0.79 1.833±0.00 N/A 4.635±2.92
ENST00000577501 N/A 11.269±4.01 N/A 11.914±0.00 3.592±2.23
ENST00000581220 11.895±1.62 10.789±4.18 15.121±0.00 12.505±0.00 6.769±3.42
ENST00000581302 N/A 4.611±1.48 N/A 9.267±0.00 5.297±4.41
ENST00000581585 N/A 9.540±5.18 N/A N/A 4.601±2.77
ENST00000584052 N/A N/A N/A N/A 15.352±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0002FI CIL_0002FI_0002 CGP
CIL_0005WY CIL_0005WY_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0007059 TAS chromosome segregation
GO:0008152 IEA metabolic process
GO:0009103 IEA lipopolysaccharide biosynthetic process
GO:0016020 IEA membrane
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0016773 IEA phosphotransferase activity, alcohol group as acceptor

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042751 riok3 protein_coding Danio_rerio
ENSMUSG00000024404 Riok3 protein_coding Mus_musculus

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