ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: ubiquitin family domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000103353 UBFD1 9606 + 16:23557362-23574389 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000395878 UBFD1-001 23557362-23574389 protein_coding
  ENST00000563366 UBFD1-006 23561665-23570857 processed_transcript
  ENST00000564106 UBFD1-008 23564460-23570710 processed_transcript
  ENST00000565634 UBFD1-007 23561833-23570575 retained_intron
  ENST00000566136 UBFD1-003 23564964-23570858 retained_intron
  ENST00000566669 UBFD1-004 23557767-23559531 retained_intron
  ENST00000567212 UBFD1-002 23557721-23574387 protein_coding
  ENST00000567264 UBFD1-005 23557727-23559840 protein_coding
  ENST00000569919 UBFD1-009 23559028-23559868 retained_intron
  ENST00000571064 UBFD1-010 23557737-23564090 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHMVEC-DHUVECENST00000395878ENST00000563366ENST00000566136ENST00000567212ENST00000567264
Transcript ID BECs HAoEC HMVEC-D HUVEC
ENST00000395878 N/A 3.620±1.28 N/A 3.908±1.89
ENST00000563366 40.266±7.30 N/A N/A N/A
ENST00000566136 N/A N/A N/A 7.722±0.00
ENST00000567212 4.040±0.00 7.455±2.00 13.223±0.00 13.944±11.49
ENST00000567264 N/A N/A N/A 24.072±4.29

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0006D4 CIL_0006D4_0001 CGP
CIL_0006D3 CIL_0006D3_0001 CGP
CIL_0006D2 CIL_0006D2_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000030870 Ubfd1 protein_coding Mus_musculus

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