ANGIOGENES: A knowledge database for angiogenesis
Institute of Cardiovascular Regeneration, Goethe University Frankfurt
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | exosome component 3 | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSG00000107371  |
EXOSC3 | 9606 | - |
9:37766978-37801437  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENST00000327304 |
EXOSC3-001 | 37779714-37785057 | protein_coding | ||
| ENST00000396521 |
EXOSC3-002 | 37780607-37785064 | protein_coding | ||
| ENST00000465229 |
EXOSC3-005 | 37766978-37785061 | nonsense_mediated_decay | ||
| ENST00000465860 |
EXOSC3-007 | 37781804-37784745 | retained_intron | ||
| ENST00000482614 |
EXOSC3-008 | 37780806-37801437 | processed_transcript | ||
| ENST00000489414 |
EXOSC3-009 | 37780691-37800709 | processed_transcript | ||
| ENST00000490516 |
EXOSC3-004 | 37780588-37784713 | processed_transcript | ||
| ENST00000496910 |
EXOSC3-006 | 37783872-37784745 | retained_intron | ||
Expression PatternsNo expression data. |
Conserved Regions | ||
|---|---|---|
| Region ID | Sub-Region | Region Type |
| CIL_0006TI | CIL_0006TI_0001 | CGP |
| CIL_00081A | CIL_00081A_0001 | VISTA |
| CIL_0006TH | CIL_0006TH_0001 | CGP |
| CIL_0006TG | CIL_0006TG_0001 | CGP |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000175 | NAS | 3'-5'-exoribonuclease activity |
| GO:0000176 | IDA | nuclear exosome (RNase complex) |
| GO:0000177 | IDA | cytoplasmic exosome (RNase complex) |
| GO:0000178 | IDA | exosome (RNase complex) |
| GO:0000288 | TAS | nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay |
| GO:0003723 | IEA | RNA binding |
| GO:0005515 | IPI | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0005730 | IDA | nucleolus |
| GO:0005737 | IDA | cytoplasm |
| GO:0005829 | TAS | cytosol |
| GO:0006364 | IDA | rRNA processing |
| GO:0010467 | TAS | gene expression |
| GO:0016070 | TAS | RNA metabolic process |
| GO:0016071 | TAS | mRNA metabolic process |
| GO:0035327 | IMP | transcriptionally active chromatin |
| GO:0043928 | IMP | exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay |
| GO:0045006 | IDA | DNA deamination |
| GO:0045190 | ISS | isotype switching |
| GO:0045830 | IEA | positive regulation of isotype switching |
| GO:0071034 | IMP | CUT catabolic process |
| GO:0090503 | NAS | RNA phosphodiester bond hydrolysis, exonucleolytic |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Description | Biotype | Species | |
|
ENSMUSG00000028322
|
Exosc3 | protein_coding | Mus_musculus | ||
