ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: sideroflexin 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000107819 SFXN3 9606 + 10:101031234-101041244 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000224807 SFXN3-201 101031239-101041240 protein_coding
  ENST00000393459 SFXN3-001 101031234-101041244 protein_coding
  ENST00000465383 SFXN3-004 101036062-101037600 processed_transcript
  ENST00000466982 SFXN3-003 101037392-101040629 processed_transcript
  ENST00000470252 SFXN3-002 101037952-101041240 processed_transcript
  ENST00000487721 SFXN3-006 101036728-101038009 processed_transcript
  ENST00000489434 SFXN3-005 101034692-101037167 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000224807ENST00000393459ENST00000466982ENST00000470252
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000224807 5.398±1.25 24.681±6.31 1.467±0.00 30.163±0.00 22.769±13.11
ENST00000393459 N/A N/A N/A N/A 20.394±12.47
ENST00000466982 N/A N/A N/A N/A 5.395±6.29
ENST00000470252 17.813±0.25 4.517±0.00 12.454±0.00 N/A 11.153±3.75

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008BD CIL_0008BD_0001 VISTA
CIL_0007U1 CIL_0007U1_0001 VISTA
CIL_000940 CIL_000940_0001 VISTA
CIL_0005NG CIL_0005NG_0001 CGP
CIL_0005NF CIL_0005NF_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0006811 IEA ion transport
GO:0008324 IEA cation transmembrane transporter activity
GO:0015075 IEA ion transmembrane transporter activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0055072 IEA iron ion homeostasis
GO:0055085 IEA transmembrane transport
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057374 sfxn3 protein_coding Danio_rerio
ENSMUSG00000025212 Sfxn3 protein_coding Mus_musculus

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