ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: FSHD region gene 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000109536 FRG1 9606 + 4:189940788-189963204 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000226798 FRG1-001 189940788-189963204 protein_coding
  ENST00000505327 FRG1-002 189961082-189963202 processed_transcript
  ENST00000507103 FRG1-003 189960748-189963188 nonsense_mediated_decay
  ENST00000514482 FRG1-005 189941024-189961176 processed_transcript
  ENST00000524583 FRG1-006 189940870-189961884 protein_coding
  ENST00000531991 FRG1-008 189940901-189957502 protein_coding
  ENST00000533157 FRG1-007 189940899-189955150 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000226798ENST00000505327ENST00000514482ENST00000524583ENST00000531991ENST00000533157
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000226798 11.477±5.20 7.116±3.55 N/A 7.541±0.00 9.313±6.86
ENST00000505327 66.021±12.27 15.145±4.06 67.560±0.00 17.279±0.00 N/A
ENST00000514482 N/A 1.821±0.00 5.798±0.00 N/A 3.597±2.98
ENST00000524583 N/A N/A N/A 3.346±0.00 2.557±0.05
ENST00000531991 4.031±0.00 5.095±1.57 N/A 8.941±0.00 1.813±0.89
ENST00000533157 8.112±0.00 N/A N/A N/A 0.341±0.00

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000398 IC mRNA splicing, via spliceosome
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0006364 IEA rRNA processing
GO:0007517 IEA muscle organ development
GO:0030674 IEA protein binding, bridging
GO:0044822 IDA poly(A) RNA binding
GO:0051015 IEA actin filament binding
GO:0071013 IDA catalytic step 2 spliceosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056504 FRG1 protein_coding Danio_rerio
ENSMUSG00000031590 Frg1 protein_coding Mus_musculus

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