ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: SPARC related modular calcium binding 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000112562 SMOC2 9606 + 6:168441151-168673445 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000354536 SMOC2-002 168441151-168667994 protein_coding
  ENST00000356284 SMOC2-001 168441151-168667994 protein_coding
  ENST00000392100 SMOC2-004 168653045-168666503 nonsense_mediated_decay
  ENST00000417208 SMOC2-005 168653084-168665224 protein_coding
  ENST00000477998 SMOC2-003 168653203-168673445 processed_transcript
  ENST00000535039 SMOC2-201 168652959-168667991 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHUVECENST00000354536ENST00000356284ENST00000392100ENST00000535039
Transcript ID HAoEC HUVEC
ENST00000354536 0.001±0.00 0.002±0.00
ENST00000356284 0.006±0.00 0.003±0.00
ENST00000392100 0.123±0.00 N/A
ENST00000535039 0.029±0.01 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0004VZ CIL_0004VZ_0001 CGP
CIL_0004W0 CIL_0004W0_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005539 IEA glycosaminoglycan binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005604 IEA basement membrane
GO:0005614 IEA interstitial matrix
GO:0007165 IEA signal transduction
GO:0008201 IEA heparin binding
GO:0010811 IEA positive regulation of cell-substrate adhesion
GO:0030198 IEA extracellular matrix organization
GO:0031012 IEA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088157 smoc2 protein_coding Danio_rerio
ENSMUSG00000023886 Smoc2 protein_coding Mus_musculus

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