ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: lamin B1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000113368 LMNB1 9606 + 5:126776623-126837020 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261366 LMNB1-001 126777148-126837020 protein_coding
  ENST00000395354 LMNB1-003 126777189-126819234 protein_coding
  ENST00000460265 LMNB1-002 126776623-126837014 processed_transcript
  ENST00000463908 LMNB1-006 126777379-126810255 processed_transcript
  ENST00000472034 LMNB1-004 126777161-126818979 processed_transcript
  ENST00000492190 LMNB1-005 126777161-126804914 processed_transcript
  ENST00000494185 LMNB1-007 126811713-126821081 retained_intron
  ENST00000504788 LMNB1-009 126777153-126836571 processed_transcript
  ENST00000512460 LMNB1-011 126818928-126826109 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHMVEC-DHUVECENST00000261366ENST00000395354ENST00000460265ENST00000472034ENST00000492190ENST00000504788ENST00000512460
Transcript ID BECs HAoEC HMVEC-D HUVEC
ENST00000261366 2.694±0.83 15.272±11.27 15.158±0.00 17.261±13.15
ENST00000395354 N/A 1.496±0.00 N/A 7.408±6.65
ENST00000460265 N/A N/A N/A 3.671±0.51
ENST00000472034 N/A 17.793±13.09 N/A N/A
ENST00000492190 N/A N/A N/A 27.459±7.45
ENST00000504788 1.861±0.00 9.026±8.39 N/A 10.329±8.55
ENST00000512460 N/A 19.860±22.24 N/A 29.887±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00041Q CIL_00041Q_0001 CGP
CIL_0007S2 CIL_0007S2_0001 VISTA
CIL_00041J CIL_00041J_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005634 IEA nucleus
GO:0005635 TAS nuclear envelope
GO:0005637 IEA nuclear inner membrane
GO:0005638 IEA lamin filament
GO:0005654 TAS nucleoplasm
GO:0005882 IEA intermediate filament
GO:0006915 TAS apoptotic process
GO:0006921 TAS cellular component disassembly involved in execution phase of apoptosis
GO:0016020 IDA membrane
GO:0031965 IDA nuclear membrane
GO:0043274 IEA phospholipase binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044299 lmnb1 protein_coding Danio_rerio
ENSMUSG00000024590 Lmnb1 protein_coding Mus_musculus

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