ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: small ubiquitin-like modifier 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000116030 SUMO1 9606 - 2:202206180-202238608 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000392244 SUMO1-007 202206768-202238566 protein_coding
  ENST00000392245 SUMO1-201 202206187-202238599 protein_coding
  ENST00000392246 SUMO1-001 202206180-202238608 protein_coding
  ENST00000409181 SUMO1-005 202206870-202238569 protein_coding
  ENST00000409205 SUMO1-010 202207031-202238462 protein_coding
  ENST00000409368 SUMO1-002 202206650-202238594 protein_coding
  ENST00000409498 SUMO1-003 202207008-202238586 protein_coding
  ENST00000409627 SUMO1-006 202207142-202238566 nonsense_mediated_decay
  ENST00000409712 SUMO1-004 202206851-202238576 protein_coding
  ENST00000469034 SUMO1-008 202207246-202222006 processed_transcript

Homo sapiens Ensembl GRCh38

Genome
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Sequences
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Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000392244ENST00000392245ENST00000392246ENST00000409181ENST00000409368ENST00000409712
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000392244 N/A 21.027±11.04 N/A 31.775±0.00 18.703±14.49
ENST00000392245 N/A N/A N/A N/A 25.126±1.47
ENST00000392246 46.517±8.51 27.847±12.50 24.701±0.00 36.821±0.00 22.715±17.06
ENST00000409181 N/A 10.126±0.00 N/A N/A 27.960±20.83
ENST00000409368 N/A N/A N/A 10.458±0.00 4.198±2.50
ENST00000409712 N/A N/A N/A N/A 18.690±15.03

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00020U CIL_00020U_0001 CGP
CIL_00020T CIL_00020T_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001650 IEA fibrillar center
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005643 TAS nuclear pore
GO:0005654 TAS nucleoplasm
GO:0005730 IDA nucleolus
GO:0005737 IEA cytoplasm
GO:0006281 TAS DNA repair
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008134 IEA transcription factor binding
GO:0016604 IEA nuclear body
GO:0016605 IDA PML body
GO:0016925 IDA protein sumoylation
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0019789 IEA SUMO ligase activity
GO:0030425 IEA dendrite
GO:0030578 IEA PML body organization
GO:0031334 IDA positive regulation of protein complex assembly
GO:0031625 IPI ubiquitin protein ligase binding
GO:0031965 IDA nuclear membrane
GO:0032436 IDA positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032880 TAS regulation of protein localization
GO:0043392 IMP negative regulation of DNA binding
GO:0043433 IMP negative regulation of sequence-specific DNA binding transcription factor activity
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0045202 IEA synapse
GO:0045892 IMP negative regulation of transcription, DNA-templated
GO:0060021 ISS palate development
GO:0060333 TAS interferon-gamma-mediated signaling pathway
GO:0060334 TAS regulation of interferon-gamma-mediated signaling pathway
GO:0090204 IEA protein localization to nuclear pore

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044267 sumo1 protein_coding Danio_rerio
ENSMUSG00000026021 Sumo1 protein_coding Mus_musculus

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