ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: guanylate binding protein 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000117226 GBP3 9606 - 1:89006666-89022894 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000235878 GBP3-002 89007769-89022838 nonsense_mediated_decay
  ENST00000370481 GBP3-008 89006666-89022882 protein_coding
  ENST00000370482 GBP3-009 89006679-89022851 retained_intron
  ENST00000445969 GBP3-006 89008935-89013299 protein_coding
  ENST00000461384 GBP3-007 89008844-89011835 protein_coding
  ENST00000475853 GBP3-004 89015320-89022860 processed_transcript
  ENST00000489444 GBP3-005 89006680-89022778 nonsense_mediated_decay
  ENST00000493594 GBP3-003 89007270-89022894 nonsense_mediated_decay
  ENST00000564037 GBP3-011 89020300-89022751 retained_intron
  ENST00000564665 GBP3-010 89014102-89022866 protein_coding
  ENST00000568006 GBP3-012 89015343-89022803 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000235878ENST00000370481ENST00000370482ENST00000445969ENST00000461384ENST00000475853ENST00000489444ENST00000493594ENST00000564665
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000235878 N/A N/A N/A N/A 0.648±0.20
ENST00000370481 1.341±0.00 1.508±1.63 1.657±0.00 19.337±0.00 6.375±6.71
ENST00000370482 N/A 0.795±0.01 N/A N/A 0.746±0.55
ENST00000445969 N/A 1.279±0.00 N/A N/A N/A
ENST00000461384 4.001±0.00 N/A N/A N/A N/A
ENST00000475853 N/A 0.679±0.00 N/A N/A 3.589±0.45
ENST00000489444 2.673±0.35 0.542±0.29 7.885±0.00 N/A 1.044±0.76
ENST00000493594 N/A 0.346±0.00 N/A 4.383±0.00 2.206±1.75
ENST00000564665 N/A 0.748±0.21 N/A N/A 0.103±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_000033 CIL_000033_0003 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005737 IEA cytoplasm
GO:0006184 IEA GTP catabolic process
GO:0016020 IEA membrane
GO:0051607 IEA defense response to virus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005627 CABZ01068209.1 protein_coding Danio_rerio
ENSDARG00000034063 CABZ01068208.1 protein_coding Danio_rerio
ENSDARG00000038668 gbp1 protein_coding Danio_rerio
ENSDARG00000038669 gbp2 protein_coding Danio_rerio
ENSDARG00000068857 gbp4 protein_coding Danio_rerio

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