ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: RNA binding motif protein 25
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000119707 RBM25 9606 + 14:73058436-73123898 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261973 RBM25-001 73058436-73123898 protein_coding
  ENST00000525161 RBM25-011 73058668-73083551 protein_coding
  ENST00000525321 RBM25-005 73058547-73101179 protein_coding
  ENST00000526754 RBM25-006 73058549-73101179 protein_coding
  ENST00000527432 RBM25-007 73058532-73120391 protein_coding
  ENST00000527449 RBM25-009 73107302-73121313 retained_intron
  ENST00000528081 RBM25-008 73071637-73120229 nonsense_mediated_decay
  ENST00000530978 RBM25-002 73109131-73110909 retained_intron
  ENST00000531500 RBM25-010 73058533-73097100 protein_coding
  ENST00000532192 RBM25-012 73097036-73100995 protein_coding
  ENST00000532483 RBM25-003 73106280-73114333 processed_transcript
  ENST00000532683 RBM25-004 73058542-73120129 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000261973ENST00000525321ENST00000526754ENST00000527432ENST00000527449ENST00000528081ENST00000531500ENST00000532683
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000261973 1.560±0.00 1.587±0.64 2.735±0.00 N/A 2.451±1.45
ENST00000525321 N/A 4.284±0.57 N/A N/A 3.800±0.72
ENST00000526754 N/A N/A N/A N/A 6.955±5.47
ENST00000527432 N/A 10.648±3.79 N/A 17.199±0.00 9.759±6.54
ENST00000527449 3.331±0.89 3.011±1.01 25.452±0.00 10.313±0.00 5.663±3.66
ENST00000528081 2.582±0.00 4.649±0.01 13.696±0.00 N/A 8.970±3.03
ENST00000531500 N/A N/A N/A N/A 3.414±2.13
ENST00000532683 N/A 2.687±1.21 N/A 9.780±0.00 3.460±2.51

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008P0 CIL_0008P0_0001 VISTA
CIL_0001TO CIL_0001TO_0001 CGP
CIL_0003OW CIL_0003OW_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000381 IDA regulation of alternative mRNA splicing, via spliceosome
GO:0003676 IEA nucleic acid binding
GO:0003729 IDA mRNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005681 IBA spliceosomal complex
GO:0005737 IEA cytoplasm
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0016607 IDA nuclear speck
GO:0042981 IDA regulation of apoptotic process
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006395 rbm25b protein_coding Danio_rerio
ENSDARG00000039266 rbm25a protein_coding Danio_rerio
ENSMUSG00000010608 Rbm25 protein_coding Mus_musculus

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