ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: SMAD family member 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000120693 SMAD9 9606 - 13:36844831-36920765 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000350148 SMAD9-001 36844831-36920238 protein_coding
  ENST00000379826 SMAD9-201 36844831-36920272 protein_coding
  ENST00000399275 SMAD9-002 36844831-36879829 protein_coding
  ENST00000483941 SMAD9-003 36879462-36920765 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000350148ENST00000379826ENST00000399275
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000350148 0.251±0.00 0.577±0.22 N/A 0.877±0.00 0.472±0.17
ENST00000379826 N/A 0.636±0.17 N/A N/A 0.656±0.38
ENST00000399275 0.783±0.27 0.900±0.34 2.610±0.00 1.512±0.00 0.954±0.65

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0004CB CIL_0004CB_0002 CGP
CIL_0000PF CIL_0000PF_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001657 IEA ureteric bud development
GO:0001666 IEA response to hypoxia
GO:0001880 IEA Mullerian duct regression
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI:IEA protein binding
GO:0005622 TAS:IEA intracellular
GO:0005634 TAS nucleus
GO:0005654 TAS nucleoplasm
GO:0005667 IEA transcription factor complex
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006468 IEA protein phosphorylation
GO:0007179 IEA transforming growth factor beta receptor signaling pathway
GO:0030509 TAS BMP signaling pathway
GO:0030618 TAS transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity
GO:0030901 IEA midbrain development
GO:0030902 IEA hindbrain development
GO:0035556 TAS intracellular signal transduction
GO:0045597 IEA positive regulation of cell differentiation
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0051216 IEA cartilage development
GO:0060348 IEA bone development
GO:0071407 IEA cellular response to organic cyclic compound

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021938 smad9 protein_coding Danio_rerio
ENSMUSG00000027796 Smad9 protein_coding Mus_musculus

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