ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: glycosyltransferase-like domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000121964 GTDC1 9606 - 2:143938068-144332568 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000241391 GTDC1-201 143946016-144211579 protein_coding
  ENST00000344850 GTDC1-202 143946016-144295318 protein_coding
  ENST00000392867 GTDC1-002 143946014-144237341 protein_coding
  ENST00000392869 GTDC1-001 143938068-144235740 protein_coding
  ENST00000392871 GTDC1-008 143946023-144211582 nonsense_mediated_decay
  ENST00000409214 GTDC1-006 143945754-144294493 protein_coding
  ENST00000409298 GTDC1-007 143946016-144235737 protein_coding
  ENST00000415569 GTDC1-005 143946033-144235739 nonsense_mediated_decay
  ENST00000417450 GTDC1-016 144145620-144319870 protein_coding
  ENST00000429978 GTDC1-015 144178834-144332568 nonsense_mediated_decay
  ENST00000437114 GTDC1-011 144141882-144235737 protein_coding
  ENST00000463875 GTDC1-004 143946827-144332516 protein_coding
  ENST00000467352 GTDC1-017 144210835-144319870 processed_transcript
  ENST00000476958 GTDC1-014 144007334-144145905 processed_transcript
  ENST00000482601 GTDC1-013 144127924-144178936 processed_transcript
  ENST00000482961 GTDC1-009 143950945-143952053 processed_transcript
  ENST00000484303 GTDC1-012 144178308-144235739 retained_intron
  ENST00000491448 GTDC1-003 144005751-144235737 retained_intron
  ENST00000542155 GTDC1-203 143946016-144332534 protein_coding
  ENST00000618778 GTDC1-204 143946016-144177217 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000241391ENST00000344850ENST00000392867ENST00000392869ENST00000392871ENST00000409214ENST00000409298ENST00000429978ENST00000437114ENST00000491448ENST00000542155ENST00000618778
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000241391 N/A N/A N/A N/A 2.372±0.67
ENST00000344850 N/A 0.814±0.04 N/A N/A 4.783±2.55
ENST00000392867 N/A 0.876±0.00 N/A N/A 1.644±0.46
ENST00000392869 0.281±0.00 0.168±0.00 N/A N/A 0.385±0.23
ENST00000392871 1.702±0.00 1.730±0.50 N/A 0.766±0.00 2.193±0.51
ENST00000409214 0.663±0.00 0.789±0.12 N/A N/A 2.279±0.77
ENST00000409298 0.501±0.00 1.254±0.00 6.987±0.00 0.518±0.00 2.134±0.88
ENST00000429978 N/A 9.360±1.66 N/A N/A 11.786±4.82
ENST00000437114 N/A N/A N/A N/A 0.084±0.00
ENST00000491448 0.551±0.00 0.876±0.00 N/A N/A 2.421±0.14
ENST00000542155 N/A 1.998±0.37 N/A N/A 2.514±1.11
ENST00000618778 1.064±0.00 2.739±1.00 N/A 0.761±0.00 2.352±0.74

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0006M8 CIL_0006M8_0001 CGP
CIL_0008S0 CIL_0008S0_0001 VISTA
CIL_0007L9 CIL_0007L9_0003 UCNEbase
CIL_0006M9 CIL_0006M9_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0009058 IEA biosynthetic process
GO:0016740 IEA transferase activity
GO:0016757 IEA transferase activity, transferring glycosyl groups

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020642 gtdc1 protein_coding Danio_rerio
ENSMUSG00000036890 Gtdc1 protein_coding Mus_musculus

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