ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: ribosomal protein L21
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000122026 RPL21 9606 + 13:27251309-27256691 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000272274 RPL21-003 27251579-27256568 protein_coding
  ENST00000311549 RPL21-001 27251309-27256568 protein_coding
  ENST00000319826 RPL21-004 27251583-27256568 protein_coding
  ENST00000326092 RPL21-005 27251597-27256568 protein_coding
  ENST00000461690 RPL21-007 27251561-27256691 nonsense_mediated_decay
  ENST00000466550 RPL21-006 27253765-27255856 retained_intron
  ENST00000473558 RPL21-002 27251362-27254467 retained_intron
  ENST00000483765 RPL21-008 27253765-27256545 nonsense_mediated_decay
  ENST00000485756 RPL21-010 27254944-27256548 retained_intron
  ENST00000493317 RPL21-009 27253705-27256307 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000272274ENST00000311549ENST00000461690ENST00000466550ENST00000493317
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000272274 435.717±10.93 113.691±29.01 92.215±0.00 72.954±0.00 110.957±21.18
ENST00000311549 283.481±40.69 131.410±66.04 N/A 228.553±0.00 288.454±200.70
ENST00000461690 366.605±30.72 110.429±25.91 79.311±0.00 80.787±0.00 174.108±65.79
ENST00000466550 N/A N/A N/A N/A 9.867±4.28
ENST00000493317 N/A N/A N/A 206.386±0.00 381.924±275.74

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0000GA CIL_0000GA_0002 CGP
CIL_0004MI CIL_0004MI_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003723 TAS RNA binding
GO:0003735 IEA:NAS structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005840 IEA ribosome
GO:0006412 IEA:NAS translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0022625 IDA cytosolic large ribosomal subunit
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010516 rpl21 protein_coding Danio_rerio
ENSMUSG00000041453 Rpl21 protein_coding Mus_musculus
ENSMUSG00000072714 Rpl21-ps4 protein_coding Mus_musculus

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