ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: ribosomal protein L5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000122406 RPL5 9606 + 1:92832025-92841924 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000315741 RPL5-006 92832109-92837469 protein_coding
  ENST00000370321 RPL5-001 92832025-92841924 protein_coding
  ENST00000461952 RPL5-004 92832762-92836271 retained_intron
  ENST00000470843 RPL5-003 92832064-92836354 nonsense_mediated_decay
  ENST00000497519 RPL5-005 92836610-92841862 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000315741ENST00000370321
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000315741 N/A N/A N/A N/A 132.073±38.10
ENST00000370321 787.506±124.70 477.900±88.01 296.069±0.00 583.623±0.00 615.671±411.76

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007CC CIL_0007CC_0002 CGP
CIL_0007CB CIL_0007CB_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003723 TAS RNA binding
GO:0003735 IEA structural constituent of ribosome
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005840 IEA ribosome
GO:0005925 IDA focal adhesion
GO:0006364 IMP rRNA processing
GO:0006412 IEA translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0008097 IEA 5S rRNA binding
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0022625 IDA cytosolic large ribosomal subunit
GO:0030529 IDA ribonucleoprotein complex
GO:0042273 IMP ribosomal large subunit biogenesis
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015862 rpl5b protein_coding Danio_rerio
ENSDARG00000020197 rpl5a protein_coding Danio_rerio
ENSMUSG00000058558 Rpl5 protein_coding Mus_musculus

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