ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: syntaxin 16
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000124222 STX16 9606 + 20:58651253-58679526 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000312283 STX16-016 58651273-58671277 protein_coding
  ENST00000355957 STX16-004 58651272-58679526 protein_coding
  ENST00000358029 STX16-010 58651879-58679526 protein_coding
  ENST00000359617 STX16-018 58651283-58679500 protein_coding
  ENST00000361770 STX16-201 58652007-58676291 protein_coding
  ENST00000361830 STX16-202 58651253-58679524 protein_coding
  ENST00000371132 STX16-001 58651605-58679526 protein_coding
  ENST00000371141 STX16-002 58651283-58679526 protein_coding
  ENST00000412911 STX16-020 58651279-58669418 protein_coding
  ENST00000438253 STX16-021 58667520-58676486 protein_coding
  ENST00000458280 STX16-019 58651272-58669424 protein_coding
  ENST00000460655 STX16-017 58651283-58670547 nonsense_mediated_decay
  ENST00000464640 STX16-005 58652007-58673711 nonsense_mediated_decay
  ENST00000467096 STX16-003 58651866-58676328 nonsense_mediated_decay
  ENST00000468590 STX16-012 58652097-58671297 processed_transcript
  ENST00000476384 STX16-006 58651303-58676291 nonsense_mediated_decay
  ENST00000483434 STX16-007 58651304-58676348 nonsense_mediated_decay
  ENST00000490700 STX16-008 58651316-58676396 processed_transcript
  ENST00000493301 STX16-015 58652026-58671284 nonsense_mediated_decay
  ENST00000496003 STX16-014 58651746-58673711 processed_transcript
  ENST00000496117 STX16-009 58651313-58671219 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHMVEC-DHUVECENST00000355957ENST00000358029ENST00000371132ENST00000371141
Transcript ID HAoEC HMVEC-D HUVEC
ENST00000355957 4.863±2.54 6.633±0.00 9.848±6.01
ENST00000358029 N/A N/A 2.156±0.00
ENST00000371132 4.656±0.99 7.498±0.00 7.022±2.77
ENST00000371141 3.922±1.55 16.674±0.00 7.396±3.23

Conserved Regions

Region IDSub-RegionRegion Type
CIL_000697 CIL_000697_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005484 IDA SNAP receptor activity
GO:0005515 IEA protein binding
GO:0005730 IDA nucleolus
GO:0005737 TAS cytoplasm
GO:0005925 IDA focal adhesion
GO:0006886 IEA intracellular protein transport
GO:0006891 IEA intra-Golgi vesicle-mediated transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016192 IEA vesicle-mediated transport
GO:0031201 IEA SNARE complex
GO:0042147 IDA retrograde transport, endosome to Golgi
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003307 stx16 protein_coding Danio_rerio
ENSMUSG00000027522 Stx16 protein_coding Mus_musculus

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