ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: hypoxia inducible factor 3, alpha subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000124440 HIF3A 9606 + 19:46297046-46343433 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000244302 HIF3A-001 46297046-46331513 retained_intron
  ENST00000244303 HIF3A-007 46298390-46339909 protein_coding
  ENST00000291300 HIF3A-009 46298458-46331513 retained_intron
  ENST00000300862 HIF3A-006 46303599-46340100 protein_coding
  ENST00000377670 HIF3A-003 46297046-46343433 protein_coding
  ENST00000472815 HIF3A-004 46298426-46338538 protein_coding
  ENST00000475432 HIF3A-002 46297046-46313363 retained_intron
  ENST00000524533 HIF3A-011 46298298-46304187 retained_intron
  ENST00000525854 HIF3A-013 46305042-46312518 processed_transcript
  ENST00000526506 HIF3A-014 46298433-46308586 nonsense_mediated_decay
  ENST00000528563 HIF3A-018 46298394-46325594 nonsense_mediated_decay
  ENST00000529205 HIF3A-015 46305086-46309196 retained_intron
  ENST00000529542 HIF3A-017 46321780-46331496 retained_intron
  ENST00000531043 HIF3A-016 46309221-46312653 nonsense_mediated_decay
  ENST00000533145 HIF3A-012 46298422-46308683 protein_coding
  ENST00000533789 HIF3A-010 46297046-46309266 nonsense_mediated_decay
  ENST00000600236 HIF3A-008 46320392-46321918 retained_intron
  ENST00000600383 HIF3A-023 46303849-46338538 protein_coding
  ENST00000600879 HIF3A-024 46303849-46308767 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000244303ENST00000291300ENST00000300862ENST00000377670ENST00000472815ENST00000475432ENST00000524533ENST00000526506ENST00000528563ENST00000529205ENST00000600236ENST00000600383
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000244303 N/A 0.335±0.19 N/A N/A 0.591±0.46
ENST00000291300 N/A 0.219±0.00 N/A N/A 0.835±0.00
ENST00000300862 N/A N/A N/A N/A 0.008±0.00
ENST00000377670 0.983±0.33 0.446±0.23 5.149±0.00 3.455±0.00 0.976±1.95
ENST00000472815 N/A 0.306±0.00 N/A N/A 0.673±0.57
ENST00000475432 N/A 0.654±0.04 N/A N/A 0.325±0.33
ENST00000524533 N/A N/A N/A N/A 0.040±0.00
ENST00000526506 N/A N/A N/A N/A 0.675±0.16
ENST00000528563 N/A N/A N/A N/A 0.172±0.00
ENST00000529205 N/A N/A N/A N/A 1.090±0.00
ENST00000600236 N/A N/A N/A N/A 1.989±0.47
ENST00000600383 1.031±0.00 0.275±0.00 N/A N/A 0.119±0.00

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001666 IEA response to hypoxia
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003713 IDA transcription coactivator activity
GO:0003714 IDA transcription corepressor activity
GO:0004871 IEA signal transducer activity
GO:0005515 IEA protein binding
GO:0005654 TAS nucleoplasm
GO:0005829 TAS cytosol
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0007165 IEA signal transduction
GO:0046983 IEA protein dimerization activity
GO:0061418 TAS regulation of transcription from RNA polymerase II promoter in response to hypoxia
GO:0071456 TAS cellular response to hypoxia

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000004328 Hif3a protein_coding Mus_musculus

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