ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: signal sequence receptor, alpha
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000124783 SSR1 9606 - 6:7268306-7347446 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000244763 SSR1-001 7281143-7313207 protein_coding
  ENST00000397511 SSR1-002 7287570-7313198 protein_coding
  ENST00000462112 SSR1-011 7296883-7313188 protein_coding
  ENST00000474597 SSR1-003 7268306-7313207 protein_coding
  ENST00000475213 SSR1-012 7268938-7289850 processed_transcript
  ENST00000479365 SSR1-007 7289676-7313182 protein_coding
  ENST00000479485 SSR1-010 7295056-7301363 protein_coding
  ENST00000483409 SSR1-009 7301390-7313231 processed_transcript
  ENST00000488834 SSR1-008 7301333-7347446 processed_transcript
  ENST00000489567 SSR1-006 7288682-7313174 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000244763ENST00000397511ENST00000462112ENST00000479365ENST00000483409ENST00000489567
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000244763 N/A 3.782±0.83 N/A N/A 4.421±2.26
ENST00000397511 21.479±0.16 25.690±5.78 7.254±0.00 45.198±0.00 17.884±12.27
ENST00000462112 N/A N/A N/A N/A 11.410±0.00
ENST00000479365 20.890±0.00 35.283±6.02 N/A N/A 30.812±7.48
ENST00000483409 N/A N/A N/A N/A 74.114±7.52
ENST00000489567 N/A 16.769±5.20 N/A 32.107±0.00 17.948±7.70

Conserved Regions

Region IDSub-RegionRegion Type
CIL_000817 CIL_000817_0001 VISTA
CIL_0003S7 CIL_0003S7_0001 CGP
CIL_0007T6 CIL_0007T6_0001 VISTA
CIL_00004W CIL_00004W_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0005789 TAS:IEA endoplasmic reticulum membrane
GO:0006412 TAS translation
GO:0006613 TAS cotranslational protein targeting to membrane
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0006987 TAS activation of signaling protein activity involved in unfolded protein response
GO:0008284 TAS positive regulation of cell proliferation
GO:0010467 TAS gene expression
GO:0016021 IEA integral component of membrane
GO:0030968 TAS endoplasmic reticulum unfolded protein response
GO:0044267 TAS cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000021427 Ssr1 protein_coding Mus_musculus

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