ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: nucleoporin 85kDa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000125450 NUP85 9606 + 17:75205659-75235758 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000245544 NUP85-001 75205691-75235758 protein_coding
  ENST00000449421 NUP85-003 75205709-75226978 processed_transcript
  ENST00000540768 NUP85-006 75228161-75235757 protein_coding
  ENST00000577208 NUP85-010 75205720-75216344 processed_transcript
  ENST00000577561 NUP85-013 75218293-75225949 retained_intron
  ENST00000577645 NUP85-014 75225368-75231977 retained_intron
  ENST00000578294 NUP85-020 75232920-75234782 retained_intron
  ENST00000578830 NUP85-012 75215801-75232954 nonsense_mediated_decay
  ENST00000578987 NUP85-021 75234667-75235757 nonsense_mediated_decay
  ENST00000579298 NUP85-004 75205720-75235691 protein_coding
  ENST00000579324 NUP85-002 75205707-75235757 protein_coding
  ENST00000579557 NUP85-025 75225103-75232952 protein_coding
  ENST00000579838 NUP85-023 75234704-75235757 protein_coding
  ENST00000579900 NUP85-024 75233125-75235758 protein_coding
  ENST00000580879 NUP85-018 75226108-75232947 nonsense_mediated_decay
  ENST00000581104 NUP85-005 75205720-75235710 nonsense_mediated_decay
  ENST00000581335 NUP85-017 75227948-75229126 processed_transcript
  ENST00000582681 NUP85-019 75231138-75232941 retained_intron
  ENST00000582833 NUP85-007 75205707-75208620 processed_transcript
  ENST00000583070 NUP85-016 75225391-75235152 protein_coding
  ENST00000583548 NUP85-009 75205720-75216365 processed_transcript
  ENST00000583569 NUP85-008 75205659-75215775 protein_coding
  ENST00000583877 NUP85-011 75218208-75226157 protein_coding
  ENST00000583948 NUP85-015 75205690-75226058 processed_transcript
  ENST00000584155 NUP85-022 75234753-75235752 nonsense_mediated_decay

Homo sapiens Ensembl GRCh38

Genome
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Sequences
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Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000245544ENST00000540768ENST00000577208ENST00000577645ENST00000579298ENST00000579324ENST00000579900ENST00000581104ENST00000583070ENST00000583569ENST00000583948ENST00000584155
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000245544 N/A 7.464±3.07 N/A N/A 13.281±6.76
ENST00000540768 N/A N/A N/A N/A 0.556±0.00
ENST00000577208 N/A N/A N/A 16.629±0.00 N/A
ENST00000577645 N/A N/A N/A N/A 2.723±1.37
ENST00000579298 N/A 7.077±2.85 N/A N/A 3.026±1.33
ENST00000579324 3.787±0.00 5.430±0.00 N/A 5.998±0.00 10.155±5.12
ENST00000579900 27.417±0.00 N/A N/A N/A N/A
ENST00000581104 2.941±0.00 N/A N/A N/A 9.722±11.29
ENST00000583070 26.519±0.23 13.901±4.99 38.158±0.00 17.079±0.00 21.500±3.75
ENST00000583569 N/A N/A N/A N/A 17.473±7.89
ENST00000583948 N/A 4.225±0.00 N/A 6.599±0.00 3.813±5.32
ENST00000584155 78.589±9.92 70.285±11.27 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008PW CIL_0008PW_0001 VISTA
CIL_0007IA CIL_0007IA_0001 CGP
CIL_0007IW CIL_0007IW_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000776 IDA kinetochore
GO:0005515 IPI protein binding
GO:0005635 TAS nuclear envelope
GO:0005829 TAS cytosol
GO:0005856 IEA cytoskeleton
GO:0005975 TAS carbohydrate metabolic process
GO:0006935 IEA chemotaxis
GO:0007077 TAS mitotic nuclear envelope disassembly
GO:0008645 TAS hexose transport
GO:0010827 TAS regulation of glucose transport
GO:0015031 IEA protein transport
GO:0015758 TAS glucose transport
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0030032 IEA lamellipodium assembly
GO:0031080 IDA nuclear pore outer ring
GO:0044281 TAS small molecule metabolic process
GO:0048246 IEA macrophage chemotaxis
GO:0051028 IEA mRNA transport
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000020739 Nup85 protein_coding Mus_musculus

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