ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: ribosomal protein L23
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000125691 RPL23 9606 - 17:38847865-38853843 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000245857 RPL23-004 38850081-38853428 protein_coding
  ENST00000378096 RPL23-006 38850439-38853629 protein_coding
  ENST00000394332 RPL23-003 38847865-38853722 protein_coding
  ENST00000394333 RPL23-002 38847865-38853735 protein_coding
  ENST00000470646 RPL23-005 38850422-38853424 protein_coding
  ENST00000479035 RPL23-001 38847867-38853843 protein_coding
  ENST00000577407 RPL23-010 38850114-38853737 protein_coding
  ENST00000577760 RPL23-007 38850684-38853764 retained_intron
  ENST00000584056 RPL23-009 38852598-38853738 retained_intron
  ENST00000584583 RPL23-011 38850086-38850661 retained_intron
  ENST00000584912 RPL23-008 38850081-38853740 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000245857ENST00000394332ENST00000470646ENST00000479035ENST00000577407ENST00000577760ENST00000584056ENST00000584912
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000245857 781.926±79.09 415.864±47.33 197.766±0.00 141.106±0.00 158.919±74.13
ENST00000394332 908.583±27.23 392.689±50.81 551.561±0.00 445.537±0.00 585.820±465.80
ENST00000470646 723.820±0.00 N/A N/A 545.731±0.00 347.472±133.80
ENST00000479035 N/A N/A N/A N/A 9.036±11.34
ENST00000577407 N/A N/A N/A N/A 206.166±118.32
ENST00000577760 N/A N/A N/A N/A 3.264±2.38
ENST00000584056 N/A N/A N/A N/A 8.968±5.54
ENST00000584912 N/A N/A N/A N/A 0.705±0.18

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00003Y CIL_00003Y_0001 CGP
CIL_0006QO CIL_0006QO_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003735 IEA structural constituent of ribosome
GO:0005515 IPI protein binding
GO:0005730 IEA nucleolus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005840 IEA ribosome
GO:0005925 IDA focal adhesion
GO:0006412 IEA translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006610 NAS ribosomal protein import into nucleus
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0022625 IDA cytosolic large ribosomal subunit
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053457 rpl23 protein_coding Danio_rerio
ENSMUSG00000071415 Rpl23 protein_coding Mus_musculus

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