ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: paired box 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000125813 PAX1 9606 + 20:21705659-21718486 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000398485 PAX1-001 21705659-21715982 protein_coding
  ENST00000444366 PAX1-002 21706223-21715109 protein_coding
  ENST00000460221 PAX1-003 21705687-21709424 processed_transcript
  ENST00000485038 PAX1-004 21708270-21709277 retained_intron
  ENST00000613128 PAX1-201 21705659-21718486 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECENST00000398485ENST00000444366ENST00000460221ENST00000613128
Transcript ID HAoEC
ENST00000398485 0.075±0.04
ENST00000444366 0.100±0.03
ENST00000460221 0.080±0.00
ENST00000613128 0.011±0.01

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008VN CIL_0008VN_0001 VISTA
CIL_0001U0 CIL_0001U0_0001 CGP
CIL_0002XI CIL_0002XI_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001501 TAS skeletal system development
GO:0001756 IEA somitogenesis
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0007389 IEA pattern specification process
GO:0008283 IEA cell proliferation
GO:0043367 IEA CD4-positive, alpha-beta T cell differentiation
GO:0043374 IEA CD8-positive, alpha-beta T cell differentiation
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0048538 IEA thymus development
GO:0060017 IEA parathyroid gland development
GO:0060349 IEA bone morphogenesis
GO:0061056 IEA sclerotome development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008203 pax1a protein_coding Danio_rerio
ENSDARG00000073814 pax1b protein_coding Danio_rerio
ENSMUSG00000037034 Pax1 protein_coding Mus_musculus

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