ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: RAB3A interacting protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000127328 RAB3IP 9606 + 12:69738681-69823204 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000247833 RAB3IP-003 69738681-69817377 protein_coding
  ENST00000362025 RAB3IP-002 69739400-69815723 protein_coding
  ENST00000378809 RAB3IP-009 69739400-69815681 nonsense_mediated_decay
  ENST00000378815 RAB3IP-006 69738862-69796647 protein_coding
  ENST00000417413 RAB3IP-005 69738862-69815723 nonsense_mediated_decay
  ENST00000481897 RAB3IP-007 69812045-69817377 retained_intron
  ENST00000483530 RAB3IP-004 69738862-69815723 protein_coding
  ENST00000526994 RAB3IP-016 69795262-69815725 protein_coding
  ENST00000547055 RAB3IP-015 69756523-69785016 protein_coding
  ENST00000547591 RAB3IP-013 69755382-69795216 nonsense_mediated_decay
  ENST00000549760 RAB3IP-012 69739109-69756650 protein_coding
  ENST00000550536 RAB3IP-001 69739390-69823204 protein_coding
  ENST00000550647 RAB3IP-014 69756486-69812834 protein_coding
  ENST00000550847 RAB3IP-017 69796573-69815550 protein_coding
  ENST00000551641 RAB3IP-008 69778950-69817181 protein_coding
  ENST00000552199 RAB3IP-010 69739408-69815723 nonsense_mediated_decay
  ENST00000552610 RAB3IP-018 69812711-69815684 retained_intron
  ENST00000553099 RAB3IP-011 69778967-69817117 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000247833ENST00000378815ENST00000417413ENST00000481897ENST00000483530ENST00000526994ENST00000547591ENST00000549760ENST00000550536ENST00000550647ENST00000550847ENST00000551641ENST00000552610ENST00000553099
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000247833 N/A 2.071±0.00 N/A N/A 0.503±0.31
ENST00000378815 N/A N/A N/A N/A 0.809±0.14
ENST00000417413 N/A 4.846±2.91 N/A 1.770±0.00 2.120±0.88
ENST00000481897 N/A N/A N/A N/A 0.304±0.00
ENST00000483530 1.044±0.00 5.862±3.09 N/A 3.095±0.00 1.775±1.08
ENST00000526994 2.079±0.00 N/A 1.454±0.00 N/A N/A
ENST00000547591 N/A N/A N/A N/A 6.406±0.00
ENST00000549760 N/A N/A N/A N/A 2.913±2.69
ENST00000550536 0.183±0.04 1.111±0.80 0.210±0.00 N/A 0.350±0.19
ENST00000550647 N/A 11.292±3.47 N/A N/A 4.839±0.00
ENST00000550847 5.615±0.00 N/A N/A N/A 5.768±2.65
ENST00000551641 N/A N/A N/A N/A 1.329±0.39
ENST00000552610 7.276±1.37 24.715±0.00 5.948±0.00 N/A 4.380±0.00
ENST00000553099 N/A N/A N/A N/A 0.091±0.00

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005813 IDA centrosome
GO:0005829 IDA cytosol
GO:0005856 IEA cytoskeleton
GO:0006612 IDA protein targeting to membrane
GO:0006893 TAS Golgi to plasma membrane transport
GO:0017112 IDA Rab guanyl-nucleotide exchange factor activity
GO:0032851 IDA positive regulation of Rab GTPase activity
GO:0033365 IMP protein localization to organelle
GO:0036064 TAS ciliary basal body
GO:0042384 IMP cilium assembly
GO:0042995 IEA cell projection

Homologs

No Homologs available.

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