ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: Usher syndrome 1C binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000130307 USHBP1 9606 - 19:17249176-17282786 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000252597 USHBP1-001 17249176-17264796 protein_coding
  ENST00000324554 USHBP1-002 17250159-17264728 nonsense_mediated_decay
  ENST00000431146 USHBP1-003 17250154-17264724 protein_coding
  ENST00000594190 USHBP1-010 17262829-17264724 protein_coding
  ENST00000595993 USHBP1-006 17262784-17264753 processed_transcript
  ENST00000596436 USHBP1-009 17263833-17264737 retained_intron
  ENST00000597928 USHBP1-004 17250158-17264714 nonsense_mediated_decay
  ENST00000598309 USHBP1-005 17264107-17282786 protein_coding
  ENST00000598570 USHBP1-007 17262584-17264749 processed_transcript
  ENST00000600286 USHBP1-008 17263840-17264745 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHHSECHUVECENST00000252597ENST00000431146ENST00000597928
Transcript ID BECs HHSEC HUVEC
ENST00000252597 15.375±0.00 N/A 6.808±0.03
ENST00000431146 N/A 41.563±0.00 N/A
ENST00000597928 N/A N/A 6.395±7.42

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00010Q CIL_00010Q_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0030165 IPI PDZ domain binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089071 ushbp1 protein_coding Danio_rerio
ENSMUSG00000034911 Ushbp1 protein_coding Mus_musculus

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